Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0697 ATGGAGTCTCGGATGGATCAGTATGAGATCATGGAGCAGATCGGTAGAGGAGCATTTGGTGCTGCTATTCTTGTTCACCACAAGGCTGAGAAGAAGAAATATGTGTTGAAAAAAATAAGGCTTGCAAGACAGACTGAACGATGCAGAAGATCTGCTCATCAAGAAATGGCTCTTATTGCTCGAATCCAGCACCCTTACATTGTGGAGTTCAAGGAGGCATGGGTTGAGAAGGGTTGCTATGTCTGCATTGTCACCGGATACTGTGAAGGTGGAGACATGGCTGAATTGATGAAAAAATTAAATGGTGCTTACTTTCCTGAGGAGAAACTCTGCAAATGGTTCACACAATTGCTGTTGGCAGTAGAATACCTACATTCAAATTATGTTTTACATCGTGACCTGAAGTGTTCCAACATCTTTCTTACCAAAGATCAGGATGTTCGCCTAGGGGATTTTGGGCTTGCCAAAACACTAAAAGCAGATGATTTGGCTTCTTCGGTGGTAGGAACTCCTAATTACATGTGTCCTGAACTGCTTGCTGATATTCCGTATGGATTCAAATCTGATATTTGGTCACTAGGGTGTTGTATATACGAGATGGCTGCTCATCGCCCAGCTTTTAAAGCTTTTGATATGGCAGGATTGATAAGCAAGATAAACCGTTCTTCCATTGGCCCTTTGCCTCCATGTTATTCCCCTTCCTTGAAAACACTGATAAAGGGCATGCTAAGAAAAAATCCTGAGCATCGACCAACAGCATCTGAGGTGTTAAAGCACCCTTATTTGCAGCCTTATGTTGATCAATATCGCCCATCTTTCAGTCCTCCAACAACCTTTTCTCCTGGAAAACCAATTTCTGCTGTCAACAATCATCGAAAAAATATGGCTGAAAGTCAAAACAGTAATAGTTCAAGTAGTGACAAAGATAGTTTGATGTCAAATGAGAAACACATTGCAACAGCAGGGCCAAGGTGTGATAACAAAGCCACTGAGATGGATCAAACATCGATCGACGATGATGGCTCAGACGAAGAAAGTGGCTCTAGTAATGCCAATGCCAAATCATCTGAGCGAGAGGTGATGAAACCATCTCATAATGAACACCATTCCAACATTGAATCTAAGCAGCCAAAAACAATTAGAAATATAATGATGGCATTGAAGGAAGGAAAAGTTAGAGAAGCAACTTCTCCAATGAGAGGAAACCGCATAAAGCCTGGTGGTGTATCAACACAAAAATTAAGCACAGAGACATTGTCTAAATTGCCTAGGCCTACTTTCATTGCTCCTAGTATGAAGCCTAATTTAGAGTCACCTGCTTCACTTTCAAGGGCAAGCCCTGAACCTGCAAAAAGAATGATGGGATCACATCATCCAAAGCATCAGATTCTGATGACAGAAGCCTCACCAAAAGTTAAAGCTAGACTTGATTTGACTCCACCATCTGCGTTTGTCAAACAAGTAGAAGGAGATGGAGGTCCTCCCAAGCCAAGACAAAGGACTCCCCCAAGCTTACTTAGAAGACCTTCATTTCCTGGAAGAATGAAGCTGGCCGGAATTGATGTTCCAAATGCAGCAAATGATACCGGGAAGCTAGGCACAAATAAAATAGTCCAGGAGCCTGAGATGAGCCCTAGCCAGTTGGCCAATGGCAGCAATGTACCACATATTTCTAGACAGGTTACTACTAGAGAGCCTCAGAAGGCTTTTGAAAGGAGTTCCAAGGGAATGCAAACAGACAGCAGCAATTCTGCCTCATCTTCGGTTTCTATCCAAGGATGTGAACTTGCCGATGATGCAACAACTTTCATTGACATGAGGGAACAGATGCTTCCTAATCCAGAGAATGTAAACCAAATTGTAGGTGTTGAATCATGTCCTGACAGCAGCCTACCTACAACTTGTGCACATTGTAAGATGGTTGAAAAGGCTCCTAAAGAAGCCTGTGAGGTTACCATGAATTTTCAGAATACTAGTAGTAGTAATGAGAAACTGAGTTCTAGTTTAACTCAAGATCACCATGTTGAGAATTCCAACGTAACACTTGCTTCAGAAGGTGGTCTTGTCATAAACCAGACAGCTACATCAGCTACTACTAACTCCAGCTGTGATAATAAATCTGTAGCCACCAAAGAAATAAAAGATTTTCAAGATATTTCCAAGGAAATGCCTTTAACCAAGTCTCCCAAACAAGTACTCCCAAGTTCTGGAGAAAAATCTGTTCATGTAGAAGTTAGTTCATTAAGTGAACCAGATATAATTAGCCAGCCAGCACTTGGATGTAAGTCCCCTGGTGATGACAAATTCACAGTGAGGGAGCGTCTCTCACCGGTGGCTGAAACTGTTCCTGTGGTCACCACTACCAAATTATCAAGCCAGAAAGTTTTGCAAGAGAAAGGAACTGTGTTGCAGAACTCAGCACCAGAAAGGCCTGACACTGGCCATCTTCCTGCAGCCTTTGATGATATTATCCATGTCATACGCCACAGTAGTTACCGCGTTGGAAGCGAGCAGCCGGTTAAGGAATCTGTGGAGATGGGTGTTCAAAATGTAGATGTTGGTAAGTATATCAATGTTGTGAGGGATGATTTAGAAATGAGGAACATAACCTCACCTTTGACCCTCACATCTTCAACTTGCTCTGATGCTGCAAGCTTGAAATCAAACAATTCTGATCAGTTGGAAACAAAGAACTTGAACACTCCTCCTCCCATCCTTAAATCTTCGAGTTTATTCAATGCTTCTAGCATGAAACCAAGCATTTCTGATAATCCTGGTCTGAAGGAACAAGATGTGAGTAACCCTCCTCCTATAGTTGCAGAACCTGATTCTGCTGAGCTCAGTAAAAGCAACAACACTCCTATGAATGAAGAGAAAGTACCACTAGCAGCAGCAAAGGAAATATTGGATGTGAAATCTTTCAGGCAGAGAGCAGAGGCACTTGAAGAGCTCTTGGAGTTGTCTGCAGAGTTGCTGCAGCAAAACAGATTGGAGGAACTTCAAGTTGTTCTGAAGCCATTTGGGAAAGACAAGGTCTCTCCAAGGGAGACAGCAATTTGGTTAGCCAGGAGTCTCAAAGGAATGATGTCTGAGGAAAGTGGAGGACGCTCTTCATGA 3117 0.4257 MESRMDQYEIMEQIGRGAFGAAILVHHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKLNGAYFPEEKLCKWFTQLLLAVEYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKTLIKGMLRKNPEHRPTASEVLKHPYLQPYVDQYRPSFSPPTTFSPGKPISAVNNHRKNMAESQNSNSSSSDKDSLMSNEKHIATAGPRCDNKATEMDQTSIDDDGSDEESGSSNANAKSSEREVMKPSHNEHHSNIESKQPKTIRNIMMALKEGKVREATSPMRGNRIKPGGVSTQKLSTETLSKLPRPTFIAPSMKPNLESPASLSRASPEPAKRMMGSHHPKHQILMTEASPKVKARLDLTPPSAFVKQVEGDGGPPKPRQRTPPSLLRRPSFPGRMKLAGIDVPNAANDTGKLGTNKIVQEPEMSPSQLANGSNVPHISRQVTTREPQKAFERSSKGMQTDSSNSASSSVSIQGCELADDATTFIDMREQMLPNPENVNQIVGVESCPDSSLPTTCAHCKMVEKAPKEACEVTMNFQNTSSSNEKLSSSLTQDHHVENSNVTLASEGGLVINQTATSATTNSSCDNKSVATKEIKDFQDISKEMPLTKSPKQVLPSSGEKSVHVEVSSLSEPDIISQPALGCKSPGDDKFTVRERLSPVAETVPVVTTTKLSSQKVLQEKGTVLQNSAPERPDTGHLPAAFDDIIHVIRHSSYRVGSEQPVKESVEMGVQNVDVGKYINVVRDDLEMRNITSPLTLTSSTCSDAASLKSNNSDQLETKNLNTPPPILKSSSLFNASSMKPSISDNPGLKEQDVSNPPPIVAEPDSAELSKSNNTPMNEEKVPLAAAKEILDVKSFRQRAEALEELLELSAELLQQNRLEELQVVLKPFGKDKVSPRETAIWLARSLKGMMSEESGGRSS 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0697 1038 MobiDBLite consensus disorder prediction 544 591 - -
Aed5g0697 1038 MobiDBLite consensus disorder prediction 398 459 - -
Aed5g0697 1038 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0697 1038 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0697 1038 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Aed5g0697 1038 MobiDBLite consensus disorder prediction 482 512 - -
Aed5g0697 1038 MobiDBLite consensus disorder prediction 358 375 - -
Aed5g0697 1038 MobiDBLite consensus disorder prediction 544 564 - -
Aed5g0697 1038 Gene3D Transferase(Phosphotransferase) domain 1 90 340 - -
Aed5g0697 1038 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Aed5g0697 1038 CDD STKc_Nek 7 262 - -
Aed5g0697 1038 MobiDBLite consensus disorder prediction 882 955 - -
Aed5g0697 1038 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Aed5g0697 1038 MobiDBLite consensus disorder prediction 319 378 - -
Aed5g0697 1038 MobiDBLite consensus disorder prediction 572 591 - -
Aed5g0697 1038 MobiDBLite consensus disorder prediction 882 929 - -
Aed5g0697 1038 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0697 1038 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 939 1021 - -
Aed5g0697 1038 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 1 869 - -
Aed5g0697 1038 MobiDBLite consensus disorder prediction 408 422 - -
Aed5g0697 1038 SUPERFAMILY Protein kinase-like (PK-like) 4 310 IPR011009 -
Aed5g0697 1038 Coils Coil 975 1001 - -
Aed5g0697 1038 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 939 1021 - -
Aed5g0697 1038 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 869 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0697 Aed-Chr5 5078676 5085253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0697 14 263 MAP Kinase Kinase Kinase AT1G53570 31.765 9.37e-37 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Aed5g0697 Pkinase 1.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0697 K08857 - gmx:100818747 1738.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0697 5 5078676 5085253 Aed5g0697 5 5078676 5085253 ECH
Aed1g0991 1 10136592 10142614 Aed5g0697 5 5078676 5085253 PCT