Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0687 ATGTCTTCCAACAAGAAAAGCCTTCTCAGAACCGTGTTCACAGCAAACGGAAGCTGTGGTTGCAGCAAAACAAAAACCTCTGAAGTGCACGAGCCAACCCCAAAATCAAAAAAACCAACACACATTCACCAAAAGCCAAACAACAACCTTAGCAGCATGGCTTCTTCCACCACTTCCCCGGAGCAAGTTGATGAAGAAGACTTCACTTCCTCCACAATCTCCGAATCCGAGACATTCGACAACCACAACCATAACAATAACAATGCTATACTCAAACGAAGCCCCCTTGTGAATAGCGTGGCGATCGAGAAGGACTCTTCGAATCCCTATCATGATTTCAGGCACTCCATGCTCCAAATGATCTTTGAGAAGGAGATCGAATCCGAGGAAGATCTTCAAGACCTTCTCCAATGCTTTCTTCACCTAAATGCGCCGTGTCACCACCACATCATCGTTAAGGCCTTCAATGAGATCTGCAAAGAGGCATTTCCTCACAAGGTTAGTACCACTCCTGCCGCGTCCCAAGCATCCCCGAGCCAGTGA 543 0.4715 MSSNKKSLLRTVFTANGSCGCSKTKTSEVHEPTPKSKKPTHIHQKPNNNLSSMASSTTSPEQVDEEDFTSSTISESETFDNHNHNNNNAILKRSPLVNSVAIEKDSSNPYHDFRHSMLQMIFEKEIESEEDLQDLLQCFLHLNAPCHHHIIVKAFNEICKEAFPHKVSTTPAASQASPSQ 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0687 180 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 100 159 IPR006458 -
Aed5g0687 180 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Aed5g0687 180 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 167 - -
Aed5g0687 180 MobiDBLite consensus disorder prediction 16 87 - -
Aed5g0687 180 ProSiteProfiles OVATE domain profile. 102 161 IPR006458 -
Aed5g0687 180 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 167 IPR038933 GO:0045892
Aed5g0687 180 Pfam Transcriptional repressor, ovate 106 161 IPR006458 -
Aed5g0687 180 MobiDBLite consensus disorder prediction 43 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0687 Aed-Chr5 5046048 5046590 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aed5g0687 Ovate 1.1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0687 - - gmx:102667780 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0687 5 5046048 5046590 Aed5g0687 5 5046048 5046590 ECH