Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0671 ATGGAAGATCATCCACATCCACCAGGGTTTCGTTTCTTCCCAACAGAAGAAGAGCTTGTTGGCTTCTACCTACACAACAAGCTACAACAAGCTCCAAGAAGTGCCGTAGCTGCAGCAGCCATAGACAGAGTTATCCCTGTTATTGACATCAATGGTGTTGAGCCGTGGAACCTTCCAACACTTGCTGGTGAGGTTTGTCGTGGGGACACGGAGCAATGGTTTTTCTTTTCGCCCGGTCAAGAGAGGGAAGCTAGAGGAGGCAGACCCAGCAGAACCACTGCTTGTGGCTATTGGAAAGCTACGGGCTCACCTGGCTATGTTTACTCTTCTGACAACAAAGTCATTGGGGTCAAGAAATCCATGGTGTTCTACAGAGGGAAAGCCCCTATGGGAAGAAAAACCAAATGGAAGATGAATGAGTACAGAGCCATCCATGTCCCTGACCAAGACCACACCCCTCAGTTGAGATGGGAATTCAGCTTGTGTCGGGTGTATGTCATATCTGGAAGCTTTCGAGCATTTGATAGACGCCCATTAGAGAAAGAAGGAGCAGAGTCATCGCGGGTTCATAGAATTGAGAACAATAAGTTTGGTGGGACACTTGGTCACAAAACCAAGAAACTGAATGGATCGTGTTCTTCTCAAATTTCTCTCTCCGATGAACTCCATGACTCCCACTCTCAGCTTCCAGAGGCTGGAGAATCAAGTAGCACAAATTGGAATGTGAATAAGAATAGTACTAATAATGATGCCCAAATCCAACCGTTGTGGGAATTGGAATGGGAACAATTTAGTTGGCTGTAA 804 0.4639 MEDHPHPPGFRFFPTEEELVGFYLHNKLQQAPRSAVAAAAIDRVIPVIDINGVEPWNLPTLAGEVCRGDTEQWFFFSPGQEREARGGRPSRTTACGYWKATGSPGYVYSSDNKVIGVKKSMVFYRGKAPMGRKTKWKMNEYRAIHVPDQDHTPQLRWEFSLCRVYVISGSFRAFDRRPLEKEGAESSRVHRIENNKFGGTLGHKTKKLNGSCSSQISLSDELHDSHSQLPEAGESSSTNWNVNKNSTNNDAQIQPLWELEWEQFSWL 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0671 267 Pfam No apical meristem (NAM) protein 7 142 IPR003441 GO:0003677|GO:0006355
Aed5g0671 267 MobiDBLite consensus disorder prediction 219 247 - -
Aed5g0671 267 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 266 - -
Aed5g0671 267 Gene3D NAC domain 15 170 IPR036093 GO:0003677|GO:0006355
Aed5g0671 267 ProSiteProfiles NAC domain profile. 6 167 IPR003441 GO:0003677|GO:0006355
Aed5g0671 267 SUPERFAMILY NAC domain 4 165 IPR036093 GO:0003677|GO:0006355
Aed5g0671 267 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 6 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0671 Aed-Chr5 4931218 4933330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0671 9 266 NAC Transcription Factor Family AT5G22380 50.193 1.51e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aed5g0671 NAM 6.6e-29 No_clan