Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0643 ATGAATCAACATTTCAGATTCAGGACCCTTTCAACTTATCATGGGGTTTGCCAATATTTTAAGCTCTTTCACCCTTCTGTTCATTGGGTTTACTTTGGTGGATGGATCCACCCCAAAGGTAAGGAGCATATTCATCACATGAACTTGATGCATGTCTACTTTACATGGGAGATCATTCACACCCCAATTCAGAATCTCCTCAGTGAAGCAAAGGAAGCAGCACTCCATCATTATAGTAAAAGCTTTCAAGGCTTCTCAGCTATGATTACACCAGAGCAAGCTAGTCAACTTGCAGAATATAAATCAGTAGTGTCCGTTTTTGAGAGCAAAATGAATAAACTTCACACAACACATTCTTGGGATTTTCTTGGACTAGAGACTGTCTACAAGAACAATCCTAAATCACTGGACACTGCATCCGATGTCATTGTTGGTGTCATTGACTCTGGCATCTGGCCGGAATCGGAAAGCTTCACTGATTATGGATTAGGTCCTGTGCCCAAAAAATTCAAGGGAGAGTGTGTTACTGAAATTGGTCCTCTAGAGGGTCTTAACAAGACTTTTTTCCGGTCAGCTCGGGATAGCGATGGACATGGAACACACACAGCTTCCACAATAGCAGGGTCCGTTGTGGCTAATGCCAGCTTATTAGGCATTGCCAAAGGAACTGCCAGAGGTGGTGCCCCAAGTGCAAGACTTGCCATCTACAAGGCCTGTTGGTTTGATTTCTGCAGCGACGCCGATATTCTTTCTGCTATAGATGATGCCATCCATGATGGAGTTGACATACTATCTCTTTCCCTTGGCCCTAACCCTCCTCAGCCAAGTTACTTTGAGAATTCAATTACTGTAGGAGCATTCCATGCATTCCAAAGGGATGTTCTTGTTTCTGCTTCAGCTGGAAACTCGGTTTTTCCACGTACTGCATGCAATGTTGCTCCTTGGATCCTCACTGTTGCTGCTAGCACAATAGACAGGGAATTCAGTTCAAATGTCTACCTTGGTAACTCAAAGGTTTTAAAGGTTTATGTGCCTTCACTTCAGGGTTCTTCTTTGAATCCAATAAGAATGGAGCATTGGCATGGTTTGATATATGGAAGTGACGCGGCAGCTGCTGGAGTTTCAGCAACAAATGCAAGCTTCTGCAAGAACAATACTCTAGATCCTACCTTAATCAAGGGTAAAATTGTAATCTGCACAATTGAGATATTCAGTGATGACAGACTAGCAAAGGCCATAGCAATAAGGCAAGGTGGGGGTGTTGGAATGATACTTATTGATCATAATGCCAAAGATGTTGGTTTTCAATTTGTCATCCCCAGCACTCTCATTGGTCAGGATGCCGTAGAAGAGCTTCAAGCGTATATAAACACAGATAAGTGA 1383 0.4295 MNQHFRFRTLSTYHGVCQYFKLFHPSVHWVYFGGWIHPKGKEHIHHMNLMHVYFTWEIIHTPIQNLLSEAKEAALHHYSKSFQGFSAMITPEQASQLAEYKSVVSVFESKMNKLHTTHSWDFLGLETVYKNNPKSLDTASDVIVGVIDSGIWPESESFTDYGLGPVPKKFKGECVTEIGPLEGLNKTFFRSARDSDGHGTHTASTIAGSVVANASLLGIAKGTARGGAPSARLAIYKACWFDFCSDADILSAIDDAIHDGVDILSLSLGPNPPQPSYFENSITVGAFHAFQRDVLVSASAGNSVFPRTACNVAPWILTVAASTIDREFSSNVYLGNSKVLKVYVPSLQGSSLNPIRMEHWHGLIYGSDAAAAGVSATNASFCKNNTLDPTLIKGKIVICTIEIFSDDRLAKAIAIRQGGGVGMILIDHNAKDVGFQFVIPSTLIGQDAVEELQAYINTDK 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0643 460 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 115 IPR037045 -
Aed5g0643 460 SUPERFAMILY Subtilisin-like 114 379 IPR036852 GO:0004252|GO:0006508
Aed5g0643 460 Gene3D Peptidase S8/S53 domain 141 324 IPR036852 GO:0004252|GO:0006508
Aed5g0643 460 Pfam Peptidase inhibitor I9 66 114 IPR010259 -
Aed5g0643 460 CDD Peptidases_S8_3 113 324 IPR034197 -
Aed5g0643 460 CDD PA_subtilisin_like 331 460 - -
Aed5g0643 460 Gene3D - 325 459 - -
Aed5g0643 460 PANTHER CUCUMISIN-LIKE 62 458 - -
Aed5g0643 460 Pfam Subtilase family 140 323 IPR000209 GO:0006508|GO:0008236
Aed5g0643 460 PRINTS Subtilisin serine protease family (S8) signature 194 207 IPR015500 -
Aed5g0643 460 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Aed5g0643 460 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 62 458 IPR045051 -
Aed5g0643 460 Pfam PA domain 378 452 IPR003137 -
Aed5g0643 460 ProSiteProfiles Serine proteases, subtilase domain profile. 119 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0643 Aed-Chr5 4737410 4740263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0643 27 460 Subtilisin-like Serine Gene Family AT5G45650 38.028 3.95e-92 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0643 - - gmx:100792672 693.73