Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0641 ATGGTCCTCCTAGGCATATTCTTTACACTTTTCAGCCTCAGTGAAGCAAAGGCAGCAACACTCCACCATTACAGTAAAAGTTTTCAAGGCTTTTCAGTCATGATTACACCAGAGCAGGCTAATCAACTTGCAGAATATAACTCAGTAGTGTCCGTTTTTGAGAGCAAAATGAATAAACTCTACACAACACATTCTTGGGATTTTCTTGGATTAGAGACTGACTACAAGAGCAACCATATAGCACTGGACACTGCAGCTGATGTCATTGTTGGTGTCATTGACTCTGGAATCTGGCCGGAATCGGAAAGCTTCACTGATCATGGATTAGGTCCTGTTCCCAAAAAATTCAAGGGAGAGTGTGTTACTGGTGATAATTTTACACTAGCCAATTGCAACAAGAAACTTATTGGTGCCCGGTACTATTCAAAGGGGTTTGAAGCATTAAATGGTCCTCTAGAGGACTTTGCCAACAGGATTTTTTTCCGGTCAGCCCGAGATAGTGGTGGGCATGGAACACACACAGCTTCCACAATAGCAGGGTCCATTGTTGCTAATGCCAGCTTATTAGGCATTGCCAAAGGAACTGCCAGAGGTGGTGCCCCAAGTGCAAGACTTGCCATCTACAAGGTATGCTGGTTTGGATTCTGCAGCGATGCCGACATTCTTTCTGCCATGGATGATGCCATCCATGATGGAGTTGACATACTATCCCTTTCCCTTGGCCCTGATCTTCCTCAGCCAATTTACTTTGAGGATGCAATCAGTATAGGAGCATTCCATGCATTTCAAAAGGGACTTCTTGTTTCTGCTGCTGCTGGAAACTCGTTTTTTCTGGGTACTGCATCCAATGTTGCTCCTTGGATCCTCACTGTTGCTGCTAGCACAATAGACAGGGAATTCAGTTCAAGTATCTACCTTGGTAACTCAAAGGTCTTAAAGGATCAGTTAGTAAATCCAGAAAGGTTTATGCTCCTTCAGGGTTCTTCTTTGAATCCAATAAGAATGGAGCAATCGTATGGTTTGATATATGGAAGTGCCGCTGCAGCTGCTGGAGTTTCAGAAACAAATGCAAGCTTCTGCAAGAACAATACTCTAGATCCTACCTTAATCAATGATAAAATTGTGATCTGTACAATTGAGAATTTCATAGGTGACGACAGACGAGAGAAGGCATTAACAATAATGCAAGGTGGGGGTGTTGGAATGATACTTATTGATCTTAATGCCAAAGATTTTGGCTTTCAATTTGTCATCCCAACCACTCTCATTGGTCAGGATGCCGAAGAAGAGCTTCAAGCATATATAGACACAGAGAAAAATCCCACTGCTAGAATATGCCCAACAATAACTGTAGTTGGTATCAAACCTGCACCAGAAGTGGCAACTTTTTCTTCCATGGGACCAAATACAATAACACCAGATATTATTAAGGCAAGTTTACTCAGAAGGCTCTATGTTTAG 1461 0.4237 MVLLGIFFTLFSLSEAKAATLHHYSKSFQGFSVMITPEQANQLAEYNSVVSVFESKMNKLYTTHSWDFLGLETDYKSNHIALDTAADVIVGVIDSGIWPESESFTDHGLGPVPKKFKGECVTGDNFTLANCNKKLIGARYYSKGFEALNGPLEDFANRIFFRSARDSGGHGTHTASTIAGSIVANASLLGIAKGTARGGAPSARLAIYKVCWFGFCSDADILSAMDDAIHDGVDILSLSLGPDLPQPIYFEDAISIGAFHAFQKGLLVSAAAGNSFFLGTASNVAPWILTVAASTIDREFSSSIYLGNSKVLKDQLVNPERFMLLQGSSLNPIRMEQSYGLIYGSAAAAAGVSETNASFCKNNTLDPTLINDKIVICTIENFIGDDRREKALTIMQGGGVGMILIDLNAKDFGFQFVIPTTLIGQDAEEELQAYIDTEKNPTARICPTITVVGIKPAPEVATFSSMGPNTITPDIIKASLLRRLYV 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0641 486 CDD Peptidases_S8_3 59 296 IPR034197 -
Aed5g0641 486 Gene3D Peptidase S8/S53 domain 87 479 IPR036852 GO:0004252|GO:0006508
Aed5g0641 486 Gene3D - 297 452 - -
Aed5g0641 486 Pfam Peptidase inhibitor I9 15 57 IPR010259 -
Aed5g0641 486 CDD PA_subtilisin_like 303 445 - -
Aed5g0641 486 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 11 479 - -
Aed5g0641 486 Pfam Subtilase family 87 357 IPR000209 GO:0006508|GO:0008236
Aed5g0641 486 SUPERFAMILY Subtilisin-like 60 470 IPR036852 GO:0004252|GO:0006508
Aed5g0641 486 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 6 61 IPR037045 -
Aed5g0641 486 PRINTS Subtilisin serine protease family (S8) signature 85 104 IPR015500 -
Aed5g0641 486 PRINTS Subtilisin serine protease family (S8) signature 166 179 IPR015500 -
Aed5g0641 486 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 11 479 IPR045051 -
Aed5g0641 486 ProSiteProfiles Serine proteases, subtilase domain profile. 65 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0641 Aed-Chr5 4731817 4734650 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0641 9 481 Subtilisin-like Serine Gene Family AT5G67360 43.424 1.34e-117 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0641 - - gmx:106794255 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0641 5 4731817 4734650 Aed5g0641 5 4731817 4734650 ECH