Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0631 ATGAGCGGCGATGGCCGGAGACGTGACCGGAGAGACAACAGAGCACCGAAGAAGCGGAAGCTGAACCGCACTCCGGAGGAAGAGCTCGAAGCAAAATTAGGGTTCGATCTCTTCTCAGAGGGCGAAAAGCGTCTCGGATGGTTACTCACTTATGCATCCTCATCTATTGACGATGAAGACAGTTACAAAGTGTACAGTTGCGTTGATCTTTACTTTGTTGCACAGGATGGCTCTTCATTCAAGGCAAAATTCAGATTTCGGCCTTATTTCTATGTAGCTACAAAGGATAAAATGGAGATGGATGTTGAAGCATACCTGAAAAGACGTTATGAAAGTCAGATTGCAGATGTTGAAATTGTAAAAAACCATTTATCTGGGTTAAGAAAATCTTATTTAAAGCTTTCATTTGATACGGTGCAACAATTGATGGATGTGAAGAGAGACTTGATGCCTACTGTTGAAAGAAATAAGGCCAAGTCTGATGCTTCAGAAGCCTTTTTGTTCATGTCAACAGAAAGAAGAGAACATAAACCTCAGGATTTTCTAGATTGCATAACTGATATTCGTGAATATGATGTTCCTTATCATATTCGCTTTGCCATTGACAACGATATACGGTGTGGCCAGTGGTATGATGTTGGAGTGTCCAGTAATGGGGTTACATTTGAGAAGAAGACAGATCTTCTGCAGCGTGCTGAAGTTCGTATTTGCGCATTTGACATTGAGACCACAAAACTTCCATTAAAATTTCCTGATGCTGATTATGATTTAGTTATGATGATTTCATACATGGTAGATGGTCAAGGGTATTTAATCATAAATAGAGAGTGTGTCGGGGATGATATAGAGGATATAGAGTACACTCCAAAACCAGAGTTTGAAGGGCATTTTAAGGTGACAAATGTTAAAAATGAGATTGAGCTTCTTAGGTTATGGTTTTCTCATATGCAAGAGGTGAAACCTGGTATCTACGTTACGTATAATGGTGATTTCTTTGATTGGCCATTCCTGGAACGAAGGGCAACCCATCATGGGTTGAAAATGAGTGATGAATTGGGGTTCAAATGCGATATGAATCAAGGGGAATGTCGTGCTAGATATGCTTGCCATTTAGATTGTTTTGCTTGGGTTAAACGTGATAGTTATCTCCCTCAGGGGAGCCAAGGCCTGAAGGCTGTTACAAAAGCAAAGTTGGGTTATGATCCAATGGAGGTGAACCCTGAGGACATGGTTCGCTTTGCAAAGGAAAAGCCACAGACAATGGCCTCCTATTCTGTTTCTGATGCAGTGGCAACTTATTACTTATATACAACTTATGTTCATCCCTTTATTTTCTCTCTTGCAACCATTATACCCATGTCACCAGATGAGGTTTTGCGCAAAGGTAGTGGAACCCTCTGTGAAATGTTGCTTATGGTGCAGGCATACAAGGCTAATGTTATATGCCCTAACAAACACCAATCTGATCCAGAGAAGTTTTATAATAGTCATCTTCTTGAGAGTGAGACGTACATTGGTGGTCATGTGGAATGTCTTGAAAGTGGCGTATTCAGATCTGATATTCCATCTAGTTTTGCACTAGAGCCATCTGCCTATCAGCAACTGATTATCAACCTTGATCGAGATCTACAGTATGCTATAACAGTGGAGGGTAAGATGGATTTGGAATTTGTTTCTAATTATGATGAAGTAAAGAATGCAATCATGGAAAAGCTTGTAAATTTACGAGATGTGCCAATACGTGAAGAATGTCCCCTCATTTATCATCTGGATGTAGCTGCTATGTATCCAAACATAATTTTAACAAACCGTCTTCAGCCACCATCAATTGTTACGGAGGAAGTTTGCACTGCGTGTGATTTTAATCGTCCCGGAAAGACTTGCCTACGCAAGCTTGAGTGGGTTTGGCGTGGAGAAACATTCACGGCAAAGAAAAGTGAATATTATGCGTTAAAGACACAGATTGAATCAGAGTCTGTTGATGATTCTGAGAAAACCAACAAGGCCTTATCCCACTATTCTGAAAAAAACAAGGCATTATCCCACTATTCTGAGAAGAAGTCATCAAAATCTTTTCTTGACCTTCCCAAGGCAGAGCAACAGTCAAGACTGAAAGAGCGTTTAAAGAAATACTGCCAGAAGGCATATAAACGGGTACTTGACAAACCTGTTACTGAACTTCGTGAAGCAGGAATCTGCATGCGTGAAAATTCATTTTATGTTGACACTGTTCGCAGGTGGGATATGGTTGTGCTTTATGATTCATTGCAACTTGCTCACAAGTGTATACTTAATTCCTTTTATGGATATGTCATGCGCAAGGGTGCAAGATGGTACTCCATGGAAATGGCTGGAGTAGTGACATATACTGGTGCAAAAATCATTCAGAATGCTCGCTTGCTAGTAGAGAAAATAGGAAAGCCACTTGAACTAGACACAGATGGTATCTGGTGTGCACTACCTGGATCTTTTCCAGAAAATTTCACTTTTAAAACAAAAGACACAAAGAAGAAGTTTACAATATCATACCCTTGTGTTATGCTTAATGTTGATGTGGCAATAAATAACACAAATGATCAATACCAGACACTCACAGGTCCAATCAGGAAAACTTATACAACTCACAGTGAATGCTCTATTGAATTTGAGGTGGATGGACCATACAAGGCAATGATCCTTCCCGCTTCCAAGGCAGAAGGAATTTTGATTAAGAAGCGATATGCTGTCTTTAATGATGATGGAACCCTTGCAGAGCTTAAAGGTTTTGAGATCAAGCGCAGAGGTGAACTGAAGCTAATAAAAGTTTTCCAGGCTGAACTTTTTGACAAGTTTCTCCACGGTTCAACCTTAGAGGAATGCTATTCAGCTGTTGCTTCAGTGGCAAACCGCTGGCTTGATCTTCTTGATAACCAGGGAAAGGATATTGCAGACAGTGAGTTGCTTGATTATATATCAGAATCAAGTACCATGAGTAAATCTTTAGCTGATTATGGTCAGCAGAAGTCTTGTGCTGTTACCACTGCTAAACGTCTAGCTGACTTTCTTGGTGATACAATGGTCAAAGATAAAGGTCTTCGATGTCAGTACATAGTAGCAAGTGAACCCAAGGGCACACCAGTAAGTGAGCGTGCTGTTCCGGTGGCAATATTTGAAACTGATGCTGAGGTAATGAAGTTCTATGTCCGAAAATGGTGCAAGGTCTCATCAAATGTTGGCATTCGATCCATTGTTGATTGGTCCTATTACAAGCAGCGCCTTAGTTCTTCAATTCAAAAAATTGTCACCATTCCTGCTGCAATGCAAAAGGTTGCAAATCCCGTCCCTAGGGTCGTTCATCCAGATTGGTTGCATAAGAAGGTCCGTGAGAAGGAGGACAGGTTTCGCCAACAAAAAATAGTTGATGCCTTTAAATCAATCAGCAGGAATGAGCACACAAAAATGGATAATGACTCAAATCGTGTCCCTCTTGTGATGGATGATGAGATTGTTCACGAGTTGGAGGACTTTGGAAACAAGGACAGGAGTTCTACATGCAGACCTAGACCAATTATACGGCATTATGAACCTAATAATGAACGACATTCAAGGCTCAGTGATCAAGGAGATTTAAAGCAACAGCATAATAATGATAATAGCAGCAAGGATCAGGTACTTTCACCATTACAACAAAATGTTGACAGAAATGTAGATTATCAAGGATGGCTTCAAATAAAGAAGCGATCATGGAAAGATATTCTGGAAAGGAGAAAGAAGCGAAGATTGGAGAATTCAAAGAAATCTAATCATGCAAATGGTGTTCTTGAACAAATGAATGGTAAGGGGAATCAGAGCAGAAGTCATGTCAGTTCATATCTTAAAAGGCTTGAGGTAGACTTAACAAAGCGTCACTGGCAGATAATACAACTAGCTCCCAGTTCACTGATAGGCCAATTTTTTGCTTGGGCTGTTGTTGATGGGAGTATGCATAAGATTCCTGTTTCTGTTCCAAGAGTCTTTTACCTGAATTCAAGATCACCAATTACTGAAGAATTTATGGGTAAACGTGTTAACAAGACTCTTCCTCATGGAAGGCATAGTTATAACTTGTATGAGGTCTCAATTAATGAAATTCAATATGGGGAAGCAAGCAAAAAACTTGCGGCTCTTCTAGCAGATCCTGATGTTGTTGAGGGAATATATGAAACTAAGGTGCCACTAGAGTTTAACGCAATAGTCCAGCTTGGTTGTGTATGTAAGGTGGACAAAACTGCTAATAAGCGTAGTCTACAAGAACCATGGAATTTGAGTGAATTGCACATGAAGACAACGACAGAATGTTCTTATCTCGAACAATCTATATCCTCCTTTTATTTATACCATAGCATCTCTGAGGGGCGGGCTATATATGTTGGATATTTTCCTGCGTCAAAAGCAATAACTGTTGTGGTAGTTAATCCCTATCAAAACAAAGATTTATCACCGACTTTTCTTGAAAAACAATTTCATGACGCTTGCCAGGCTTTGTCTATTGAGCCACCTCCGAGGAATGGTATTAATTTTAAGCTGGACTATGTTGCACATGTCAAGGATGCTGAAGCAGTGATGCAAAGAGCAATAAATGGTCACAGTCATGGGAGGGAAAATCATGTGCCCATGGTTGCTGTCATTGAATGCCCAAATGTTCAATCAGTAAAATTGGGCATCGGAGCTCTGGATGACTTTCCATGCCTTAGTGTTCCTTATAATGCACGTGATAGTCAATACCAGATTCTTGGATGGCAACAAGTTGCTGCTAAAACTGGAATGCAACGTTGTGCTGCATCAGTCCAATGGCTAAATCAAAGAATTGCTCTCTCAAGATATGCCCATGTACTTTGGATATCTGATGATGGCCTTCCAGATTTAGGTGGGATTAATGGTGAACAAAACTGTTTTGTCGATGAGGTCCAACAACCTGTTCTCACATATCCTGGAGCTTATAGAAACGTAACTGTGGAGCTAAAGATATACAACCTGGCTGCAAATGCTCTTCTCAAATACAACCTAGTTAATGAGATGGAAGGAGGCACTCTATTAGGATTTGGTCATGAACTTGATTCTGGAACATTTTCCACGAATGATCAGAATGGTTTTGACGAGTCTACCTCATGTGCACAAGCCTTTCGAGTCCTTAAACAGTTGATGCAGCGGTGCCTAGCAGATGTACTTACATCTGGAAATAATTATGCTGATTCAATTTTGCGACATCTGTATAGATGGCTTTGCAGCCCTAAATCAAAACTTCATGATCCAACTCTCCACCAACTACTCCACAAGGTCATGCAAAAGGTCTTCGCATTGTTGTTGGCAGAGCTCCGGAAGTTAGGTGCTACAATTGTATTTGCAAACTTTTCAAAGATTGTTATAGACACTGGGAAATATGATCTGTCTAGAGCAAAAGCTTATTGTGACAGTATGTTGAGAACTTTAAAATCTAGGGATCTATTTGAATGGATTGAGCTTGAACCACTGCAGTTTTGGTGCTCGTTGTTATTTATGGACCAGTATAACTATGGAGGAATACAAGCAAAGTCTGATGAAACCGTAAATGATGAATCTCAAGTAGACATTATATCGAGCTGGAATATTGCTGAATACTTGCCAGAAAAAATCAGAGACCATTTTGTTTTAATCGTTTCTCAATTCATGTATTTTCCCTGGGAACATGCAAAAAATCAAGCACAAATCAGGGCCTCGTTGCAGAATGGCAACTCCTGTACCCCATCAATTAACATTGGAGGGATGAACAAATCAGTGAACAATCAGAGTATTTCAGGTCTTCCTCAATTTATGGGTGATGTCCATAAAGGGGATGCTGCCTTGGAATTTATCAAGCATGTCTGTGCTGTCCTGGCCCTTGACCAAAGTGTGCAGCATGAAGTTTTGGTCTTGAGAAGGAATTTGCTCAAATATGTTGATGTGAAGGAATTTGCTCCAGAAGCCAAGTTTCATGGTCCTGGTCATTCATTCATCTTATCCAATGTCATATGCAGCTATTGTAATGACTGCAGAGACTTGGACTTGTGCCGTGATTCGGATTTATTAACCGAGGAGTGGCATTGTGCGGTGCCGCAGTGTGGCCAGCCTTATGACCGCGAGGTGATGGAAAACGCGCTTCTTCAAACTGTAAGACAAAGAGAACGGCTATACCACCTGCAAGATCTGGTGTGTACAAGGTGCTATCAGGTGAAAGCTGCACATTTGGCTGAGCAATGTGCATGTGCAGGCTCATTTAGGTGCAAGGAAGATGCAACTGAATTTCGTGAAAAAATGCAAATTTTCTTTAGCATAGCTTCTCGTCAGAAATTCCAACTTCTCCAAGAATGTACCTCTTGGATTTTAGAACTTAGATAG 6372 0.4049 MSGDGRRRDRRDNRAPKKRKLNRTPEEELEAKLGFDLFSEGEKRLGWLLTYASSSIDDEDSYKVYSCVDLYFVAQDGSSFKAKFRFRPYFYVATKDKMEMDVEAYLKRRYESQIADVEIVKNHLSGLRKSYLKLSFDTVQQLMDVKRDLMPTVERNKAKSDASEAFLFMSTERREHKPQDFLDCITDIREYDVPYHIRFAIDNDIRCGQWYDVGVSSNGVTFEKKTDLLQRAEVRICAFDIETTKLPLKFPDADYDLVMMISYMVDGQGYLIINRECVGDDIEDIEYTPKPEFEGHFKVTNVKNEIELLRLWFSHMQEVKPGIYVTYNGDFFDWPFLERRATHHGLKMSDELGFKCDMNQGECRARYACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPMEVNPEDMVRFAKEKPQTMASYSVSDAVATYYLYTTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYNSHLLESETYIGGHVECLESGVFRSDIPSSFALEPSAYQQLIINLDRDLQYAITVEGKMDLEFVSNYDEVKNAIMEKLVNLRDVPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTEEVCTACDFNRPGKTCLRKLEWVWRGETFTAKKSEYYALKTQIESESVDDSEKTNKALSHYSEKNKALSHYSEKKSSKSFLDLPKAEQQSRLKERLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRRWDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKTKDTKKKFTISYPCVMLNVDVAINNTNDQYQTLTGPIRKTYTTHSECSIEFEVDGPYKAMILPASKAEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSAVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGQQKSCAVTTAKRLADFLGDTMVKDKGLRCQYIVASEPKGTPVSERAVPVAIFETDAEVMKFYVRKWCKVSSNVGIRSIVDWSYYKQRLSSSIQKIVTIPAAMQKVANPVPRVVHPDWLHKKVREKEDRFRQQKIVDAFKSISRNEHTKMDNDSNRVPLVMDDEIVHELEDFGNKDRSSTCRPRPIIRHYEPNNERHSRLSDQGDLKQQHNNDNSSKDQVLSPLQQNVDRNVDYQGWLQIKKRSWKDILERRKKRRLENSKKSNHANGVLEQMNGKGNQSRSHVSSYLKRLEVDLTKRHWQIIQLAPSSLIGQFFAWAVVDGSMHKIPVSVPRVFYLNSRSPITEEFMGKRVNKTLPHGRHSYNLYEVSINEIQYGEASKKLAALLADPDVVEGIYETKVPLEFNAIVQLGCVCKVDKTANKRSLQEPWNLSELHMKTTTECSYLEQSISSFYLYHSISEGRAIYVGYFPASKAITVVVVNPYQNKDLSPTFLEKQFHDACQALSIEPPPRNGINFKLDYVAHVKDAEAVMQRAINGHSHGRENHVPMVAVIECPNVQSVKLGIGALDDFPCLSVPYNARDSQYQILGWQQVAAKTGMQRCAASVQWLNQRIALSRYAHVLWISDDGLPDLGGINGEQNCFVDEVQQPVLTYPGAYRNVTVELKIYNLAANALLKYNLVNEMEGGTLLGFGHELDSGTFSTNDQNGFDESTSCAQAFRVLKQLMQRCLADVLTSGNNYADSILRHLYRWLCSPKSKLHDPTLHQLLHKVMQKVFALLLAELRKLGATIVFANFSKIVIDTGKYDLSRAKAYCDSMLRTLKSRDLFEWIELEPLQFWCSLLFMDQYNYGGIQAKSDETVNDESQVDIISSWNIAEYLPEKIRDHFVLIVSQFMYFPWEHAKNQAQIRASLQNGNSCTPSINIGGMNKSVNNQSISGLPQFMGDVHKGDAALEFIKHVCAVLALDQSVQHEVLVLRRNLLKYVDVKEFAPEAKFHGPGHSFILSNVICSYCNDCRDLDLCRDSDLLTEEWHCAVPQCGQPYDREVMENALLQTVRQRERLYHLQDLVCTRCYQVKAAHLAEQCACAGSFRCKEDATEFREKMQIFFSIASRQKFQLLQECTSWILELR 2123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0631 2123 MobiDBLite consensus disorder prediction 1204 1221 - -
Aed5g0631 2123 Pfam DNA polymerase family B, exonuclease domain 74 393 IPR006133 -
Aed5g0631 2123 Coils Coil 2119 2123 - -
Aed5g0631 2123 SUPERFAMILY DNA/RNA polymerases 462 1117 IPR043502 -
Aed5g0631 2123 MobiDBLite consensus disorder prediction 1260 1280 - -
Aed5g0631 2123 MobiDBLite consensus disorder prediction 1171 1203 - -
Aed5g0631 2123 CDD POLBc_epsilon 497 1102 - -
Aed5g0631 2123 CDD DNA_polB_epsilon_exo 233 436 - -
Aed5g0631 2123 SMART polmehr3 232 822 IPR006172 GO:0000166|GO:0003676|GO:0003887
Aed5g0631 2123 MobiDBLite consensus disorder prediction 1171 1221 - -
Aed5g0631 2123 Pfam Domain of unknown function (DUF1744) 1616 1847 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Aed5g0631 2123 Pfam DNA polymerase family B 694 1044 IPR006134 GO:0000166|GO:0003677
Aed5g0631 2123 SMART DUF1744_2 1489 1847 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Aed5g0631 2123 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 32 2120 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Aed5g0631 2123 MobiDBLite consensus disorder prediction 1 26 - -
Aed5g0631 2123 Gene3D - 921 1105 IPR042087 -
Aed5g0631 2123 Gene3D Palm domain of DNA polymerase 578 917 IPR023211 -
Aed5g0631 2123 SUPERFAMILY Ribonuclease H-like 62 483 IPR012337 -
Aed5g0631 2123 MobiDBLite consensus disorder prediction 1253 1280 - -
Aed5g0631 2123 Gene3D - 231 461 IPR036397 GO:0003676
Aed5g0631 2123 Gene3D DNA Polymerase, chain B, domain 1 51 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0631 Aed-Chr5 4591239 4618846 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0631 5 2120 Core DNA Replication Machinery Family AT2G27120 64.302 0.0 2833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0631 K02324 - gmx:100812003 3861.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0631 5 4591239 4618846 Aed5g0631 5 4591239 4618846 ECH