Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0630 CCGCGTGGGTTTAAAATCCAAAAAACACGCAGCAGCATTCACTTCAGTCACAGTTCAGCACCTGACACCCTTCTTCTGCCTTCGCTTCTCCCCAAAACCATGGAGGATCTAACCGAAGACCTCCACAGCCTCAGCTTCGCCTCCACGGCAGACAACAAGCGCAGCACAAGCTTCAGTTCCTCAACCACAACCACCACCACCTTCACTCCCTCAACCTCCTCCCACTTCAATGCCAAGCCACACGCGCCCTCCTCCGACCCCTGCTCTGCCTTCGTCCACCGTGCCCGCCCCCTCCCACTCGCACTCTCCGACCTCCGCTTCACGCGCCGCCTCGGCTCCGGCGACATGAGCGCCGTGTATCTCGCGGAGCCGAAGGAAGGCGGAGGCGCGGTGTTCGCGGCGAAGGTGATGGAGAGGGAGGACTTGGCGAGGAGGAACAAGGAAGGGAGGGCGAGGACAGAGAGGGAAATTCTGGAAATGTTGGATCATCCTTTTTTGCCCACGCTCTACGCTTCCATCCACGCGCCTAAGTGGCTCTGTTTCTTGACGCCGTTTTGCCCCGGCGGTGACTTGCACGTCCTCCGCCAGCGTTTCCCCAACAAACGCTTCCTCGAATCCGCCGTCAGGTTCTACGCATCGGAAGTGTTGTTGGCACTTGAATACCTACACATGTTGGGAGTAATCTACCGCGACCTGAAGCCCGAAAACGTGTTAATACGCTCAGACGGCCACATCATGCTCACAGACTTCGACCTCTCTTTAAAGTGCGACGATTCCACATCAACGGCTCAGATAATCTCCAATCAGAACCCTCTCCCCACCGTCCCACGCCACGTGGAATCGACACGCGCCACCTCGTCTTCATGCATAATCCCCAACTGCATAGTCCCCACCGCATCATGCTTCCAACCAAAACGCAAGCGGAAGAAGAAGCAAACCCATTTTAACGGGCCTGCGTTCGTGGCCGAGCCCATTAACTTCCGGTCAATGTCATTCGTGGGGACCCACGAGTACCTAGCGCCGGAGATCGTGTCCGGGGAGGGACACGGTAGCGCCGTGGACTGGTGGACTTTGGGGATATTCATGTTCGAACTGTTTTACGGCGTGACGCCGTTCAAGGGCATGGACCACGAGCTAACCCTGGCGAACGTGGTGGCTCGAGCCCTTGAGTTCCCGAAGGAACCCGCGGCTTCGGGTGCCATGAAAGAGCTCATATCGCAGCTGCTGGTTAAGGACCCGGCGAAAAGGCTCGGCTCGGTGATGGGGGCTTCCTCGATCAAGCACCACTCCTTTTTCCATGGCGTGAATTGGGCGCTGCTCAGGTGCACCACTCCACCCTTCGTACCGCCGCCGCCACCACCACCACCACCTAATGCGAAAGCTGTATATGACGATGATCGTGAAACTTGTCCAGAGATTTTCATTGACTGTTATTAA 1437 0.572 PRGFKIQKTRSSIHFSHSSAPDTLLLPSLLPKTMEDLTEDLHSLSFASTADNKRSTSFSSSTTTTTTFTPSTSSHFNAKPHAPSSDPCSAFVHRARPLPLALSDLRFTRRLGSGDMSAVYLAEPKEGGGAVFAAKVMEREDLARRNKEGRARTEREILEMLDHPFLPTLYASIHAPKWLCFLTPFCPGGDLHVLRQRFPNKRFLESAVRFYASEVLLALEYLHMLGVIYRDLKPENVLIRSDGHIMLTDFDLSLKCDDSTSTAQIISNQNPLPTVPRHVESTRATSSSCIIPNCIVPTASCFQPKRKRKKKQTHFNGPAFVAEPINFRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFMFELFYGVTPFKGMDHELTLANVVARALEFPKEPAASGAMKELISQLLVKDPAKRLGSVMGASSIKHHSFFHGVNWALLRCTTPPFVPPPPPPPPPNAKAVYDDDRETCPEIFIDCY 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0630 478 Pfam Protein kinase domain 108 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0630 478 Pfam Protein kinase domain 329 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0630 478 Gene3D Transferase(Phosphotransferase) domain 1 328 450 - -
Aed5g0630 478 Gene3D Transferase(Phosphotransferase) domain 1 190 265 - -
Aed5g0630 478 PANTHER FLIPPASE KINASE 1-RELATED 32 478 - -
Aed5g0630 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Aed5g0630 478 SUPERFAMILY Protein kinase-like (PK-like) 82 457 IPR011009 -
Aed5g0630 478 MobiDBLite consensus disorder prediction 52 81 - -
Aed5g0630 478 ProSitePatterns Protein kinases ATP-binding region signature. 111 135 IPR017441 GO:0005524
Aed5g0630 478 PANTHER OS11G0150700 PROTEIN 32 478 - -
Aed5g0630 478 Gene3D Phosphorylase Kinase; domain 1 104 189 - -
Aed5g0630 478 SMART serkin_6 105 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0630 478 MobiDBLite consensus disorder prediction 52 80 - -
Aed5g0630 478 ProSiteProfiles Protein kinase domain profile. 105 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0630 Aed-Chr5 4587070 4590194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0630 34 478 AGC Kinase Gene Family AT3G44610 60.991 0.0 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aed5g0630 Pkinase 2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0630 K08286 - gmx:100811470 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0630 5 4587070 4590194 Aed5g0630 5 4587070 4590194 ECH