Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed5g0610 | ATGGAAGCACCAATGGAGTTTTGGGGTAACTTCCTCTATTCTCTCTCTCTTTTCACTTCATTTCGTGTTGAGGTCAAGGTGGGGCAAACTTTGAAGGTTGATCCAACGGATCCTTTGAATGCATACGTACACATTTCTCAGGTTGCCCTCGGAGAGGCGAAAAAGGAGAAACCTAATGAGTCTGTGGTTCTTTACTTGAAAGTTGATGACCAGAAGATTGTCTTGGGAACCCTTTCTAGGGATGGCATCCCTCATCTGGCGTTGGATTTGGTTCTGGATTCTGAGTCTGAGCTCTCCCACACTTCGAAAAGTGCTAGTGTCTTTTTTTGTGGATACAAAGTTCTAACATGTTGTTTTATTTTGACAGATAGTGAAGAAGAGGATGAGGATCTTGCATTGGAGGGTCTAGAGAATGGTAGATTCTTCCTCTTGATGCGAAATACATTTTTAGATATGGAAGATGGTAGCGATAGTGATGATGAGAGTGATGAAGACGATGAAGAGACCCCTGTTAAGAAGGTGGATCAGGGCAAGAAGAGACCCAATGAGTCTGCAACAAAGACTCCTGTTTCTGCCAAGAAAGCTAAAACTGCTACTCCTGAAAAGACTGATGGTAAGAAAAGTGTACATGTAGCAACTCCTTATCCTACGAAGAAGGGTGGAAAGACTCCCAATAGTGCAAAAGGCCAGAGTCCTAGTTCTGCTGGACTATCTTGTGCAAGTTGTAAAAAGGGTTTCACCAACGAAGCTGGTCTGCAACAACATAAGAAGGCTAAGCATGGTGGTCAGTGA | 792 | 0.4343 | MEAPMEFWGNFLYSLSLFTSFRVEVKVGQTLKVDPTDPLNAYVHISQVALGEAKKEKPNESVVLYLKVDDQKIVLGTLSRDGIPHLALDLVLDSESELSHTSKSASVFFCGYKVLTCCFILTDSEEEDEDLALEGLENGRFFLLMRNTFLDMEDGSDSDDESDEDDEETPVKKVDQGKKRPNESATKTPVSAKKAKTATPEKTDGKKSVHVATPYPTKKGGKTPNSAKGQSPSSAGLSCASCKKGFTNEAGLQQHKKAKHGGQ | 263 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed5g0610 | 263 | MobiDBLite | consensus disorder prediction | 219 | 241 | - | - | |
Aed5g0610 | 263 | MobiDBLite | consensus disorder prediction | 153 | 241 | - | - | |
Aed5g0610 | 263 | Pfam | Nucleoplasmin-like domain | 23 | 113 | IPR041232 | - | |
Aed5g0610 | 263 | PANTHER | 32 KDA HEAT SHOCK PROTEIN-RELATED | 22 | 132 | - | - | |
Aed5g0610 | 263 | PANTHER | 32 KDA HEAT SHOCK PROTEIN-RELATED | 125 | 259 | - | - | |
Aed5g0610 | 263 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 239 | 260 | IPR013087 | - | |
Aed5g0610 | 263 | Gene3D | Nucleoplasmin core domain | 16 | 116 | - | - | |
Aed5g0610 | 263 | MobiDBLite | consensus disorder prediction | 154 | 168 | - | - | |
Aed5g0610 | 263 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 237 | 263 | IPR013087 | - | |
Aed5g0610 | 263 | PANTHER | HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 | 22 | 132 | - | - | |
Aed5g0610 | 263 | PANTHER | HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 | 125 | 259 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed5g0610 | Aed-Chr5 | 4466607 | 4469699 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed5g0610 | 5 | 141 | C2H2 Transcription Factor Family | AT5G03740 | 43.066 | 1.69e-22 | 92.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed5g0610 | - | - | gmx:100802220 | 335.495 |