Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0602 ATGGAGAGAAGTACTGATTACAGTTCAGAGGAGGAATGCATGGAGGATTATCGGCGTGGAGGTTATCACGCGGTTCGAATCGGGGACACTTTCAACAATCGCCGCTACGTCGTTCAGTCCAAACTCGGTTGGGGCCATTTTTCCACCGTCTGGCTCGCTTCCGATACTCTCAATTCGTTGCGAAAATGTTGCATTGTTTATGTTCCGTTTCCTGTTTTAGTTGCGGAGGGAAGGGTGAGAACTGAGAACAGACTTCGCAAAACCTTTAACATTGGAGACAAGATGAAAATTATTTTGAACTCTCTTAATGAAGGGGAAAGGCTTTCTTGTTTGCAGCGTTATGTAGCCCTTAAAATTCAGAAGAGTGCGCAGCACTATACTGAAGCCGCGATGGATGAGATAAAAATTCTCAAACAAATAGCTGAGGGGGACCTGGATGATAAGAAATGTGTTGTGAAGCTTTTGGATCATTTTAAGCATTTGGGGCCTAATGGCCAGCATGTGTGTATGGTTTTTGAGTTCCTGGGTGATAATCTTCTCACCCTTATCAAATATAGTGACTATCGTGGGCTTCCTCTTCCCATGGTCAAAGAAATCTGTTTTCACATTTTGGTGGGCTTGGATTACTTGCATCGCGAGCTTTCTCTCATACACACTGATTTGAAGCCAGAGAATGTGTTGCTTCTGTCACTGATAAATCCATCTAAAGATCCTAGGAAATCAGGTGCTCCACTCATCCTTCCGAACACCAAGGATAAGGCTGTGTCCAACAATGGAACTAACCAAGACAATAAGAATTTGAGTGGAGATCCGATGAAGAACCAGAAAAAGAAAATGCAGCGGAAGGCTAAGGTAGCTCAAGGCTGTGTTGAGAAGGAAACTTCAGAGGAAGCTGATGATTATAAAGGACTTGAGCAAGAAGATTGTGGCAATGACGCGAAATCAAGTGTGGAATCTGTTGAAGATAAACCTAACAGTTCTTTGAGTAAAGATGAATCAACAAAGACTTTCGAAACGCATGTTTCACTAGGAAGTCATAGTCATAGGAGAGGTAGCCGTTCCATGAGAAAGAAGTTGCTGGCAGCTGTTGATCTTAAATGCAAGCTGGTTGATTTTGGTAGTGCTTGTTGGACTTACAAACAATTCACAAATGATATTCAGACAAGGCAATATAGGTGTCCTGAGGTTCTTATTGGATCCAAATACTCAACTCCAGCAGATTTATGGTCCTTTGCTTGCATTTGTTTTGAGCTTGCCACTGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGATAGAGATGAGGATCATCTGGCATTGATGATGGAGCTTCTTGGGAAGATGCCTCCCAAGATGGCACTAGGTGGTCGCTATTCCCGAGAATTTTTCAATAGACATGGTGACTTGAGGCACATCAGTAATTTGCGATTCTGGCCAATGGATAAGGTGCTGAGGGAGAAGTATAGTTTCGGCGAGCAAGACACAAGTGACTTGGTTGACTTCCTTGTTCCAATACTTGATTTTGGCCCAGAAAAGAGACCAACAGCTGCTCAGTGCCTTAGTCATCCATGGATGAGTGCAGGTCCTCGGACTCTTGAACCGTCAATAACTACCGTGCAACCTGATGCCATTGATGAGGAATCGTCTGAAAAGAGGAAGAGGGAGACGGCTGAGAAGGAGGCAGTGGAAATTGGATTAAGGAATATAGCCATTAAAGGATCTTCTTTGGGTCCTCTCAAAGACTCGCAACCTCTAAAGCCATTCAAATAG 1776 0.4352 MERSTDYSSEEECMEDYRRGGYHAVRIGDTFNNRRYVVQSKLGWGHFSTVWLASDTLNSLRKCCIVYVPFPVLVAEGRVRTENRLRKTFNIGDKMKIILNSLNEGERLSCLQRYVALKIQKSAQHYTEAAMDEIKILKQIAEGDLDDKKCVVKLLDHFKHLGPNGQHVCMVFEFLGDNLLTLIKYSDYRGLPLPMVKEICFHILVGLDYLHRELSLIHTDLKPENVLLLSLINPSKDPRKSGAPLILPNTKDKAVSNNGTNQDNKNLSGDPMKNQKKKMQRKAKVAQGCVEKETSEEADDYKGLEQEDCGNDAKSSVESVEDKPNSSLSKDESTKTFETHVSLGSHSHRRGSRSMRKKLLAAVDLKCKLVDFGSACWTYKQFTNDIQTRQYRCPEVLIGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGKMPPKMALGGRYSREFFNRHGDLRHISNLRFWPMDKVLREKYSFGEQDTSDLVDFLVPILDFGPEKRPTAAQCLSHPWMSAGPRTLEPSITTVQPDAIDEESSEKRKRETAEKEAVEIGLRNIAIKGSSLGPLKDSQPLKPFK 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0602 591 PANTHER SERINE KINASE-LIKE PROTEIN 5 55 - -
Aed5g0602 591 Gene3D Transferase(Phosphotransferase) domain 1 172 528 - -
Aed5g0602 591 Pfam Protein kinase domain 364 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0602 591 Pfam Protein kinase domain 113 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0602 591 SUPERFAMILY Protein kinase-like (PK-like) 31 540 IPR011009 -
Aed5g0602 591 Gene3D Phosphorylase Kinase; domain 1 12 99 - -
Aed5g0602 591 MobiDBLite consensus disorder prediction 284 345 - -
Aed5g0602 591 MobiDBLite consensus disorder prediction 546 561 - -
Aed5g0602 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Aed5g0602 591 MobiDBLite consensus disorder prediction 251 269 - -
Aed5g0602 591 SMART serkin_6 36 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0602 591 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 109 584 - -
Aed5g0602 591 MobiDBLite consensus disorder prediction 238 350 - -
Aed5g0602 591 Gene3D Phosphorylase Kinase; domain 1 100 171 - -
Aed5g0602 591 CDD STKc_SRPK 25 527 - -
Aed5g0602 591 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 5 55 - -
Aed5g0602 591 PANTHER SERINE KINASE-LIKE PROTEIN 109 584 - -
Aed5g0602 591 ProSiteProfiles Protein kinase domain profile. 36 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0602 591 MobiDBLite consensus disorder prediction 532 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0602 Aed-Chr5 4390304 4393971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0602 4 576 EF-hand Containing Proteins AT5G22840 61.005 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Aed5g0602 Pkinase 1.9e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0602 K08832 - gmx:100790060 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0602 5 4390304 4393971 Aed5g0602 5 4390304 4393971 ECH
Aed1g1068 1 10593575 10597433 Aed5g0602 5 4390304 4393971 PCT