Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed5g0591 | ATGGCTATTGCTGGTCTACACAGTGTGTCTGTGCTCGACTCTTCTTTCCTGAGGGACTCCCATTCTCAGTCGTCTGGGAGAGGGGGAGATGGAAGACGAGGAAGCACCCGGTCATCTTCGCTCTTGCAAATGTGGCGAGAGATTGAAGATGAACATGTGGTGAATCAAGGAAGAACTGGTGAAGTACCTCTTGAACAGAGGGATGGGTTGGTTGTGAACCTTTCAGAAGAAGATAGACTGGATATTCAAGAAAGAGGGCAGAGGCATGTTTTAGAAGATGCGGTTTTGGGTGAGAATGAATCTGAAGCATGGTCACAGTCGCCAAGTCAGAATGAATCCCATGATGGTCATGAGGATTTAAACAATTCTAGCTGTGAGAACTCTTCTGACATGGGAGAAGTTGAAAGGGTAAGAGTGAGGCAAATTTTCAGGGAATGGATGAATAGTGGTGCTAGGGATCATGTACCAAACATTTCCAGAAGAAATAACGGATCAAGGGGAGAATGGCTTGGGGAAACTGAGCAGGAAAGGGTGAGAGTTATTAGGGAGTGGGTACAAACAAGTAGCCAGCAGAGAAGCATTTCTTCTGGGGAAAACAGGGAAGAACCATCTGCTGAAATTGATACACAAATTGAACGTGTGCGTGATGGACTCATTGTTAACCAGATTGGGGGCCAAACTGAGCATACACGGAGGGGCATACGTAAATTATGTGGCCGACAGGCTATGCTTGATATGCTTAAGAAGGCTGAGAGAGAAAGGCAAAGAGAAATTCAGGAGTTGTTGGACCATCGGGCTGTATCGCAATTCCCCTATCGTAATCGTATTCAGGCACTGCTTAGAGGCAGATTCTTGAGAAATGATAGACCTGCAGTTGATAATAACAGGCCCCTTTCTGTTGCCGAAAGTGAATTGGGCTTCTTGAGACGAAGACAAACTGTATCAGGTCTAAGGGAAGGATTTTTCTCTAGAAAGGAGAATAGTGGTTGCAGTCAAGCAACCAGCAATGTATCTGATACCTCGTCTAATGTTGAAATTGATTTTAATACAAATGAACTAATGGAATCAAGCAGTTCACATGTAGTCCCAAGTGTACATTCTGAAGAGTCTGACCCTAATGACAGAGGAAGCAATGGACTTGGGGTATCAGGCAGCCAGAACTGTGTACAAGGTACCACGTGTGAGAATTTAGATTGGCAAAAATTTACTGCTCAAGTAGGAGATCAGTTGCAGCATTTGCCAACTGAATCACTAGATTGTCAATCCTCATTCAGTGCTGAAGTTGAAAGAGGAGACAACACTGAGCAAAGTGTCGATGTGATGCCAACTGAAGATACTGCTAATGAAGTTATGCAACAAAGCTTGCGAATTGAAGATTCAGAGCATAGTAATAATCAAGAATTCAGTGAGGTGCATAATGAGCAGTCTGAGCTGGGTGATATAAATAATTGTGAAAACAATTCTTCAAATAACAGCATTCATATGGAGGATAATGTTGTTGCTGATGTAAATTGGAATGAATCTGGTGCTCTAGAAGAACAACCAGACGAAGTTTTCGAAAATGAAGGAAGCGAGTGGTATCAAAATAATACCGAATGGAGAAATAGCACTGAGGAAAATGTGGATGATAATCAGCTCAGTAATACAGCAAATGAGTGGCCTGAAAATGGTTTGGGAAATGAGGATGGGGAAAACTCTCGTCCACAAGAATCTCATGAAGTGTGGCAAGAAGATGGTGGCTTCCAAGAAGCTGTTGAAAATTGGTTGGGAGGACCTTCTGATCATGAAAGTGCTCCAGTTGGTAGAATTCGTGGATTTTATTTTCCTGAAGATGACAATGTGTACAGTGTTGAACTCAGGGAACTTCTTAATAGGAGAAGTGTCTCTAACCTCCTTGGCAGCAGTTTCCGTGATAGTCTTAATCAGTTGATACAGTCATATGTTGATAGGCAAGGTCATGCTCACATTGACTGGGAGTTGCAGGAGACAACTCCTTCTTCTGCCTCAGTAGAGCAGGAGCTTGAGCAGCAGAGTAGGGATCAAATTGTTGGTCAGGAGGAGGGTACTGTTAGTCCACTTAACCTGCCCTCTCTACCTATACCGCCTCCTCTGCCTATTTGGGACCAGCACCGCCATCGTGACAACTGGTCACAGAATGACATAAATAATCAGCGTATAGTAATTGATTGGGAGATTATTAATGATATGAGAGTTGACATGGCTCGATTACAGCAAAGGATGAATAACATGCAGAGAATGCTGGAGGCTTGTATGGATATGCAGCTTGAGTTGCAGCGATCTATAAGGCAAGAAGTTTCTGCAGCCCTAAATCGCTCTGCTGGTTCATCAGGAATACATGATTGCGAGTCACCAGAAGATAAATCTAAATGGGAATGTGTTAGAAAAGGACTTTGCTGTATATGCTGCGAAAGCAATATCGATTCTTTGTTGTACAGATGTGGTCATTTGTGTACATGTTCAAAATGTGCCAATGAGTTGCTCCAAAGCCGAAGGAAGTGCCCAATGTGTCAAGCTCCTGTGGTGGAGGTGATACGTGCTTATTCTATACAATAA | 2574 | 0.432 | MAIAGLHSVSVLDSSFLRDSHSQSSGRGGDGRRGSTRSSSLLQMWREIEDEHVVNQGRTGEVPLEQRDGLVVNLSEEDRLDIQERGQRHVLEDAVLGENESEAWSQSPSQNESHDGHEDLNNSSCENSSDMGEVERVRVRQIFREWMNSGARDHVPNISRRNNGSRGEWLGETEQERVRVIREWVQTSSQQRSISSGENREEPSAEIDTQIERVRDGLIVNQIGGQTEHTRRGIRKLCGRQAMLDMLKKAERERQREIQELLDHRAVSQFPYRNRIQALLRGRFLRNDRPAVDNNRPLSVAESELGFLRRRQTVSGLREGFFSRKENSGCSQATSNVSDTSSNVEIDFNTNELMESSSSHVVPSVHSEESDPNDRGSNGLGVSGSQNCVQGTTCENLDWQKFTAQVGDQLQHLPTESLDCQSSFSAEVERGDNTEQSVDVMPTEDTANEVMQQSLRIEDSEHSNNQEFSEVHNEQSELGDINNCENNSSNNSIHMEDNVVADVNWNESGALEEQPDEVFENEGSEWYQNNTEWRNSTEENVDDNQLSNTANEWPENGLGNEDGENSRPQESHEVWQEDGGFQEAVENWLGGPSDHESAPVGRIRGFYFPEDDNVYSVELRELLNRRSVSNLLGSSFRDSLNQLIQSYVDRQGHAHIDWELQETTPSSASVEQELEQQSRDQIVGQEEGTVSPLNLPSLPIPPPLPIWDQHRHRDNWSQNDINNQRIVIDWEIINDMRVDMARLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSAGSSGIHDCESPEDKSKWECVRKGLCCICCESNIDSLLYRCGHLCTCSKCANELLQSRRKCPMCQAPVVEVIRAYSIQ | 857 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed5g0591 | 857 | MobiDBLite | consensus disorder prediction | 98 | 133 | - | - | |
Aed5g0591 | 857 | MobiDBLite | consensus disorder prediction | 535 | 555 | - | - | |
Aed5g0591 | 857 | SUPERFAMILY | RING/U-box | 804 | 850 | - | - | |
Aed5g0591 | 857 | MobiDBLite | consensus disorder prediction | 18 | 39 | - | - | |
Aed5g0591 | 857 | MobiDBLite | consensus disorder prediction | 354 | 384 | - | - | |
Aed5g0591 | 857 | PANTHER | PROTEIN, PUTATIVE-RELATED | 1 | 857 | - | - | |
Aed5g0591 | 857 | ProSiteProfiles | Zinc finger RING-type profile. | 805 | 844 | IPR001841 | - | |
Aed5g0591 | 857 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 789 | 855 | IPR013083 | - | |
Aed5g0591 | 857 | Coils | Coil | 733 | 760 | - | - | |
Aed5g0591 | 857 | MobiDBLite | consensus disorder prediction | 535 | 573 | - | - | |
Aed5g0591 | 857 | MobiDBLite | consensus disorder prediction | 189 | 208 | - | - | |
Aed5g0591 | 857 | Coils | Coil | 240 | 267 | - | - | |
Aed5g0591 | 857 | Pfam | Zinc finger, C3HC4 type (RING finger) | 802 | 849 | - | - | |
Aed5g0591 | 857 | CDD | mRING-HC-C3HC5_NEU1 | 805 | 843 | - | - | |
Aed5g0591 | 857 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 1 | 857 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed5g0591 | Aed-Chr5 | 4303674 | 4310923 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed5g0591 | 805 | 851 | C3H Transcription Factor Family | AT3G06140 | 42.553 | 1.49e-06 | 49.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed5g0591 | - | - | gmx:100801329 | 1504.96 |