Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0591 ATGGCTATTGCTGGTCTACACAGTGTGTCTGTGCTCGACTCTTCTTTCCTGAGGGACTCCCATTCTCAGTCGTCTGGGAGAGGGGGAGATGGAAGACGAGGAAGCACCCGGTCATCTTCGCTCTTGCAAATGTGGCGAGAGATTGAAGATGAACATGTGGTGAATCAAGGAAGAACTGGTGAAGTACCTCTTGAACAGAGGGATGGGTTGGTTGTGAACCTTTCAGAAGAAGATAGACTGGATATTCAAGAAAGAGGGCAGAGGCATGTTTTAGAAGATGCGGTTTTGGGTGAGAATGAATCTGAAGCATGGTCACAGTCGCCAAGTCAGAATGAATCCCATGATGGTCATGAGGATTTAAACAATTCTAGCTGTGAGAACTCTTCTGACATGGGAGAAGTTGAAAGGGTAAGAGTGAGGCAAATTTTCAGGGAATGGATGAATAGTGGTGCTAGGGATCATGTACCAAACATTTCCAGAAGAAATAACGGATCAAGGGGAGAATGGCTTGGGGAAACTGAGCAGGAAAGGGTGAGAGTTATTAGGGAGTGGGTACAAACAAGTAGCCAGCAGAGAAGCATTTCTTCTGGGGAAAACAGGGAAGAACCATCTGCTGAAATTGATACACAAATTGAACGTGTGCGTGATGGACTCATTGTTAACCAGATTGGGGGCCAAACTGAGCATACACGGAGGGGCATACGTAAATTATGTGGCCGACAGGCTATGCTTGATATGCTTAAGAAGGCTGAGAGAGAAAGGCAAAGAGAAATTCAGGAGTTGTTGGACCATCGGGCTGTATCGCAATTCCCCTATCGTAATCGTATTCAGGCACTGCTTAGAGGCAGATTCTTGAGAAATGATAGACCTGCAGTTGATAATAACAGGCCCCTTTCTGTTGCCGAAAGTGAATTGGGCTTCTTGAGACGAAGACAAACTGTATCAGGTCTAAGGGAAGGATTTTTCTCTAGAAAGGAGAATAGTGGTTGCAGTCAAGCAACCAGCAATGTATCTGATACCTCGTCTAATGTTGAAATTGATTTTAATACAAATGAACTAATGGAATCAAGCAGTTCACATGTAGTCCCAAGTGTACATTCTGAAGAGTCTGACCCTAATGACAGAGGAAGCAATGGACTTGGGGTATCAGGCAGCCAGAACTGTGTACAAGGTACCACGTGTGAGAATTTAGATTGGCAAAAATTTACTGCTCAAGTAGGAGATCAGTTGCAGCATTTGCCAACTGAATCACTAGATTGTCAATCCTCATTCAGTGCTGAAGTTGAAAGAGGAGACAACACTGAGCAAAGTGTCGATGTGATGCCAACTGAAGATACTGCTAATGAAGTTATGCAACAAAGCTTGCGAATTGAAGATTCAGAGCATAGTAATAATCAAGAATTCAGTGAGGTGCATAATGAGCAGTCTGAGCTGGGTGATATAAATAATTGTGAAAACAATTCTTCAAATAACAGCATTCATATGGAGGATAATGTTGTTGCTGATGTAAATTGGAATGAATCTGGTGCTCTAGAAGAACAACCAGACGAAGTTTTCGAAAATGAAGGAAGCGAGTGGTATCAAAATAATACCGAATGGAGAAATAGCACTGAGGAAAATGTGGATGATAATCAGCTCAGTAATACAGCAAATGAGTGGCCTGAAAATGGTTTGGGAAATGAGGATGGGGAAAACTCTCGTCCACAAGAATCTCATGAAGTGTGGCAAGAAGATGGTGGCTTCCAAGAAGCTGTTGAAAATTGGTTGGGAGGACCTTCTGATCATGAAAGTGCTCCAGTTGGTAGAATTCGTGGATTTTATTTTCCTGAAGATGACAATGTGTACAGTGTTGAACTCAGGGAACTTCTTAATAGGAGAAGTGTCTCTAACCTCCTTGGCAGCAGTTTCCGTGATAGTCTTAATCAGTTGATACAGTCATATGTTGATAGGCAAGGTCATGCTCACATTGACTGGGAGTTGCAGGAGACAACTCCTTCTTCTGCCTCAGTAGAGCAGGAGCTTGAGCAGCAGAGTAGGGATCAAATTGTTGGTCAGGAGGAGGGTACTGTTAGTCCACTTAACCTGCCCTCTCTACCTATACCGCCTCCTCTGCCTATTTGGGACCAGCACCGCCATCGTGACAACTGGTCACAGAATGACATAAATAATCAGCGTATAGTAATTGATTGGGAGATTATTAATGATATGAGAGTTGACATGGCTCGATTACAGCAAAGGATGAATAACATGCAGAGAATGCTGGAGGCTTGTATGGATATGCAGCTTGAGTTGCAGCGATCTATAAGGCAAGAAGTTTCTGCAGCCCTAAATCGCTCTGCTGGTTCATCAGGAATACATGATTGCGAGTCACCAGAAGATAAATCTAAATGGGAATGTGTTAGAAAAGGACTTTGCTGTATATGCTGCGAAAGCAATATCGATTCTTTGTTGTACAGATGTGGTCATTTGTGTACATGTTCAAAATGTGCCAATGAGTTGCTCCAAAGCCGAAGGAAGTGCCCAATGTGTCAAGCTCCTGTGGTGGAGGTGATACGTGCTTATTCTATACAATAA 2574 0.432 MAIAGLHSVSVLDSSFLRDSHSQSSGRGGDGRRGSTRSSSLLQMWREIEDEHVVNQGRTGEVPLEQRDGLVVNLSEEDRLDIQERGQRHVLEDAVLGENESEAWSQSPSQNESHDGHEDLNNSSCENSSDMGEVERVRVRQIFREWMNSGARDHVPNISRRNNGSRGEWLGETEQERVRVIREWVQTSSQQRSISSGENREEPSAEIDTQIERVRDGLIVNQIGGQTEHTRRGIRKLCGRQAMLDMLKKAERERQREIQELLDHRAVSQFPYRNRIQALLRGRFLRNDRPAVDNNRPLSVAESELGFLRRRQTVSGLREGFFSRKENSGCSQATSNVSDTSSNVEIDFNTNELMESSSSHVVPSVHSEESDPNDRGSNGLGVSGSQNCVQGTTCENLDWQKFTAQVGDQLQHLPTESLDCQSSFSAEVERGDNTEQSVDVMPTEDTANEVMQQSLRIEDSEHSNNQEFSEVHNEQSELGDINNCENNSSNNSIHMEDNVVADVNWNESGALEEQPDEVFENEGSEWYQNNTEWRNSTEENVDDNQLSNTANEWPENGLGNEDGENSRPQESHEVWQEDGGFQEAVENWLGGPSDHESAPVGRIRGFYFPEDDNVYSVELRELLNRRSVSNLLGSSFRDSLNQLIQSYVDRQGHAHIDWELQETTPSSASVEQELEQQSRDQIVGQEEGTVSPLNLPSLPIPPPLPIWDQHRHRDNWSQNDINNQRIVIDWEIINDMRVDMARLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSAGSSGIHDCESPEDKSKWECVRKGLCCICCESNIDSLLYRCGHLCTCSKCANELLQSRRKCPMCQAPVVEVIRAYSIQ 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0591 857 MobiDBLite consensus disorder prediction 98 133 - -
Aed5g0591 857 MobiDBLite consensus disorder prediction 535 555 - -
Aed5g0591 857 SUPERFAMILY RING/U-box 804 850 - -
Aed5g0591 857 MobiDBLite consensus disorder prediction 18 39 - -
Aed5g0591 857 MobiDBLite consensus disorder prediction 354 384 - -
Aed5g0591 857 PANTHER PROTEIN, PUTATIVE-RELATED 1 857 - -
Aed5g0591 857 ProSiteProfiles Zinc finger RING-type profile. 805 844 IPR001841 -
Aed5g0591 857 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 789 855 IPR013083 -
Aed5g0591 857 Coils Coil 733 760 - -
Aed5g0591 857 MobiDBLite consensus disorder prediction 535 573 - -
Aed5g0591 857 MobiDBLite consensus disorder prediction 189 208 - -
Aed5g0591 857 Coils Coil 240 267 - -
Aed5g0591 857 Pfam Zinc finger, C3HC4 type (RING finger) 802 849 - -
Aed5g0591 857 CDD mRING-HC-C3HC5_NEU1 805 843 - -
Aed5g0591 857 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0591 Aed-Chr5 4303674 4310923 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0591 805 851 C3H Transcription Factor Family AT3G06140 42.553 1.49e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0591 - - gmx:100801329 1504.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1077 1 10660193 10666180 Aed5g0591 5 4303674 4310923 PCT