Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0589 ATGAAATTACGATTTCATCCTTCTTATTCCGAAATCCAGAGAACAATATATTCGTCCCTCTCTTTGCTTTCCCACTCTCAAATTCTCGCTTCTCAGTTTTTGAGGATGGGTCAGATCCAGTACTCCGATAAGTACTTCGATGACACTTATGAATATAGACATGTGGTTCTTCCTCCTGAAGTCACCAAAATGCTTCCCAAGAATCGTCTTCTCTCCGAAAATGAGTGGAGAGCAATTGGGGTTCAGCAGAGCCGTGGGTGGGTTCATTATGCAATTCATCGCCCCGAGCCACACATAATGCTCTTCAGGAGGCCTTTGAATTATCAGCAGCAGCAGGAAAACCAGGCCCAGCAAAGCATGCTTGTCAAATGA 372 0.4462 MKLRFHPSYSEIQRTIYSSLSLLSHSQILASQFLRMGQIQYSDKYFDDTYEYRHVVLPPEVTKMLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQSMLVK 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0589 123 SUPERFAMILY Cell cycle regulatory proteins 26 117 IPR036858 GO:0016538
Aed5g0589 123 SMART CKS_2 38 107 IPR000789 GO:0016538
Aed5g0589 123 PRINTS Cyclin-dependent kinase regulatory subunit signature 38 52 IPR000789 GO:0016538
Aed5g0589 123 PRINTS Cyclin-dependent kinase regulatory subunit signature 90 104 IPR000789 GO:0016538
Aed5g0589 123 PRINTS Cyclin-dependent kinase regulatory subunit signature 53 67 IPR000789 GO:0016538
Aed5g0589 123 PRINTS Cyclin-dependent kinase regulatory subunit signature 75 89 IPR000789 GO:0016538
Aed5g0589 123 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 31 120 - -
Aed5g0589 123 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 31 120 - -
Aed5g0589 123 Pfam Cyclin-dependent kinase regulatory subunit 39 105 IPR000789 GO:0016538
Aed5g0589 123 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 41 59 IPR000789 GO:0016538
Aed5g0589 123 Gene3D - 19 119 IPR036858 GO:0016538
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0589 36 117 Core Cell Cycle Gene Families AT2G27970 90.244 1.43e-52 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0589 K02219 - gmx:547737 178.718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0589 5 4285377 4287031 Aed5g0589 5 4285377 4287031 ECH