Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0582 ATTTACTCATACACTTGGAGTTGGTATACCACATTACATCTTCAGTGTCATAGTAGTCAGTTTAAAATATTTAAAGCAAAAACATTATCATTGGCTAACTATATAGGTCATCAATTTCGTAGCACTATCAATTTAGTGTACTATATTTTGTCTCTTGAATTGTTTTCCCTTCTTTATATCTCTCACCAAGTGTTATCCATGGACACAATAATGGATTTTCATCATCAAGAGACTCAAGTGTACATTAATGACTTTGTAGAAGATCCCGGCTTAGATCATGAGTTTATCAATTTGATTAGTTGGGAGGATAAAGAAGCTATCTGTAACTTCAATTCTGAGCTTATGATCAATGAAGCCTCATTCATTGATAACTCATTCTTGTCACACCCTGCAACAACAGCTACTGAAAGTGCTAATAATAAACCAAGACCAAAATCTGATAGGTCCAAATCTTTGGTTTCTGAGAGGAGAAGAGAACGAACGAAGGAGAAGCTTTATACATTGCGGTCTTTGGTTCCAAACATAACTAAGGGAGGTATGGACTTGTTTCAAGTAGATGAAAAAGGGTTTTATGTGAAAATAGTGTGCAATAAAGGAGAAGGTGTGGCTGCCTCATTGTACAAGTCTCTTGAGTCTCTGACAGGCTTCAATGTTCATAATTCAAACTTGGCCACAGTTTCTGACACTTTTCAACTTACATTTTCATTGAATGCAAAAGGGTCTGAGCCAGAAATTAACCTTCCCAACTTGAAGCTATTGGTGACTGAAGCTTTTGTGAACCAAGGCTTTGAATCCATACCTCTTTTCATGCTTGACTATTTCAATCTATAA 831 0.3598 IYSYTWSWYTTLHLQCHSSQFKIFKAKTLSLANYIGHQFRSTINLVYYILSLELFSLLYISHQVLSMDTIMDFHHQETQVYINDFVEDPGLDHEFINLISWEDKEAICNFNSELMINEASFIDNSFLSHPATTATESANNKPRPKSDRSKSLVSERRRERTKEKLYTLRSLVPNITKGGMDLFQVDEKGFYVKIVCNKGEGVAASLYKSLESLTGFNVHNSNLATVSDTFQLTFSLNAKGSEPEINLPNLKLLVTEAFVNQGFESIPLFMLDYFNL 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0582 276 MobiDBLite consensus disorder prediction 141 161 - -
Aed5g0582 276 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 180 267 - -
Aed5g0582 276 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 127 177 - -
Aed5g0582 276 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 127 177 - -
Aed5g0582 276 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 180 267 - -
Aed5g0582 276 MobiDBLite consensus disorder prediction 132 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0582 Aed-Chr5 4243908 4245259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0582 163 263 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 54.808 1.05e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0582 - - gmx:100778649 152.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0582 5 4243908 4245259 Aed5g0582 5 4243908 4245259 ECH
Aed1g1086 1 10720197 10721459 Aed5g0582 5 4243908 4245259 PCT