Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0566 ATGCAGAAATCGGGATACGGTGGCGACGGAATATACAGGTCTCTAAGGCCTCCTTTGGTTCTTCCAAAGGACCCAAACCTCTCACTCGTATCATTCCTCTTCCAAAGCGTTTCCTCTTTCCAATCCAAAACGGCTCTCGTCGATGCAGATTCTTCCAAAACACTTACCTTTGCGCAGCTCAAATCCCAAGTTGCTAAGCTCGCCCACGGTTTCCTCAAACTAGGTCTAACCAAAAACGACGTCGTTCTCTTGTTCGCTCCCAACAGCATCCAATTCCCCGTATGCTTCCTCGCCGCCACCGCCATCGGCGCCGTCGTCTCCACCGCCAATCCCGTTTACACCATCGCCGAAGTCGCCAAACAAGCCAAAGACTCCAACCCCAAGCTCGTCATCACCGTCCCCGAATTATGGGACAAAGCGAAAAATCTCAACCTCCCCGCCCTAATTATCGATTCCGCAAACCAGCTCAAGGATCTTATTGATCGTTGTAACGGTCCTACAAATGCAGCGTCCAGAATTACGAGTCTCGACGCGGTGATGGAAATGGCGGGGCCGGAGACGGAGCTGCCGGAGAGCGGCGTGAAGCAGGGGGACACGGCGGCGCTATTATACTCATCGGGAACGACGGGGCTGAGCAAGGGCGTGGTGTTGACGCACCGGAACTTCATCGCGGCGGCGGTGATGATCGGCATGGACGACGACCTCGCCGGGGTGCTAGACGACGTGTACATGTGCGTCTTGCCGATGTTCCACGTGTTCGGGCTGGCGGTTGTGACGTACGCGGCGCTGCGCAGAGGGAGCGCGGTGGTGGTGATGAAGAGGTTCGAGTTGGAGGTGCTGCTGAAGGCGATTCAGAAGCACAGGGTTACGAACCTGTGGCTCGTGCCTCCGATCCTGCTTGCTCTGGCGAAACAGAGCGTGGTTCGGAACTACGATCTTTCGTCGTTGAGGCGTATTGGTTCGGGTGCAGCTCCCCTAGGGAAAGACTTGATGCAAGACTGTGGCAAGCGTTTTCCTCATGTTGCCATTTGTCAGGGTTACGGTATGACAGAAACTTGTGGCATTGTTTCTGTAGAGAATCCAAGAGTAGGGGTTCGTCACAGTGGCTCAACGGGAATGCTGGGTTCAGGAATCGAAGCTCAAATAGTGAATGTGGATACACATAAGTCTCTTCCTCCTAGACAGTTCGGAGAGATATGGGTGCGAGGTCCTAACATGATGCAAGGTTATCACAACAATCCACAGGCCACAAGATTGACTATAGATGAAAAGGGGTGGGTACATACAGGAGATCTTGGATATTTTGATGAAGATGGACAACTTTATGTGGTTGACCGTATCAAAGAATTGATCAAGTACAAAGGTTTTCAGGTTGCACCAGCAGAGCTTGAAGGGCTTCTCATTTCCCACCCTGAAATACTAGACGCCGTTGTTGTCCCATATCCCGATGATGAGGCTGGTGAGGTTCCAATTGCCTATGTTGTTCGCTCTCCCAATAGTTCACTGAATGAAGAAGAAGTTAAGAAATTTATTGCTAATCAGGTTGCGCCTTTCAAAAAATTGCGAAGGGTAACATTTATCAACAGTGTTCCTAAGACAGCTTCAGGAAAAATTCTCAGAAGAGAGCTTACTGCAAAAGCAAGATCCAAAATATAA 1656 0.5085 MQKSGYGGDGIYRSLRPPLVLPKDPNLSLVSFLFQSVSSFQSKTALVDADSSKTLTFAQLKSQVAKLAHGFLKLGLTKNDVVLLFAPNSIQFPVCFLAATAIGAVVSTANPVYTIAEVAKQAKDSNPKLVITVPELWDKAKNLNLPALIIDSANQLKDLIDRCNGPTNAASRITSLDAVMEMAGPETELPESGVKQGDTAALLYSSGTTGLSKGVVLTHRNFIAAAVMIGMDDDLAGVLDDVYMCVLPMFHVFGLAVVTYAALRRGSAVVVMKRFELEVLLKAIQKHRVTNLWLVPPILLALAKQSVVRNYDLSSLRRIGSGAAPLGKDLMQDCGKRFPHVAICQGYGMTETCGIVSVENPRVGVRHSGSTGMLGSGIEAQIVNVDTHKSLPPRQFGEIWVRGPNMMQGYHNNPQATRLTIDEKGWVHTGDLGYFDEDGQLYVVDRIKELIKYKGFQVAPAELEGLLISHPEILDAVVVPYPDDEAGEVPIAYVVRSPNSSLNEEEVKKFIANQVAPFKKLRRVTFINSVPKTASGKILRRELTAKARSKI 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0566 551 ProSitePatterns Putative AMP-binding domain signature. 202 213 IPR020845 -
Aed5g0566 551 Gene3D - 449 550 IPR045851 -
Aed5g0566 551 Pfam AMP-binding enzyme 35 453 IPR000873 -
Aed5g0566 551 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 4 550 - -
Aed5g0566 551 Pfam AMP-binding enzyme C-terminal domain 462 537 IPR025110 -
Aed5g0566 551 Gene3D - 10 448 IPR042099 -
Aed5g0566 551 CDD 4CL 21 543 - -
Aed5g0566 551 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 550 - -
Aed5g0566 551 SUPERFAMILY Acetyl-CoA synthetase-like 21 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0566 Aed-Chr5 4131002 4136065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0566 1 551 Monolignol Biosynthesis Gene Families AT4G05160 67.695 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0566 K01904 - gmx:100808944 927.546