Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0544 ATGTGTCTGAATAGGAGGAAGGATCTAGTTCCTGACATAGTGGCAGACAACACACATAAGATATTGAATATGTTTGGTGCATGCTCAGCTCAATTGTCATACGACCAAAACAATTGTACATCAAATGAAACCGGGCAAGGGACAAGGTACAGTTGCAAGTCAGCGCAGGATTCATGCAGAACATTCTTGGTGTATAGGGCCAACAATCATTTCAACACTATTTCAGAAGTCTCAAAGCTCTTCAACATGAACTCTGATGAGGTGCTTCAGAAAAACAACCTCACACCTTCCTCTTTGTATCATGTACTCAAACAAGGTAAAGAGGTTCTTATTCCCGTCAATTGCACCTGCTCTGGCAAGTATTTTCAAGCCAGTTTAAGCTACAAAGTCCTTCACAACACAACATATTCCGAGGTTGCTTGTGGTGTTTTTGAAGGGCTGCTGAAATATCTCACACTGGCTGAGGAAAACCCTTCACAGGGTAGTAATAAGCTAGAAGCTGGCTCTGAGCTTCATGTGCCTCTCTTATGTGCTTGTTCTGAGAGTTACAATTTGACAAGGAGCATGAAGGTGAAGTACCTTGTCACATACCCTCTAATACTAGAAGATGATCCTGACAAACTGAGTAAAAAATTTGGTATCTCAACTGAAGATTTTTTTGCAGCTAATAGCTTGAATACCTGGTCAACTGTTTATCCTGACACAATTGTTTTAGTTCCATTAAAGGATGGTCCAATCAGAATACTTGATATTCCTGATTCTCCTCCTCCACCTCCTGATTTTCTTCCCACAAAACCAGTGTTTGTGACCGAGCCATCCACACAGCCATCAAATTTGTACATTGCAGGATCTATTATAGGATTCTTTTTGTTCATGACATTGCTTGCAAGTGGATTGTACATGAAGAGAATGAGGAAAAGTGATGTTGTCCATTCCTTTAGTCAAACAAATTCCCTCACTTTATGGTCACCAATTAGAAGCTCTCATGCATCTACTCAAACGGGTAAAAGCTCTACAACATGGTGCCTTTCCCCGGATCTTCTTGTAGGAATAAAGTACTACTTACTCAATTACAGCATGGAAGAACTCAAAAAGGCCACCAAGAATTTCAGTGAAGAAAACAAGATCTGCCACAACCAGGGTCGCGACGGTGGCGACTTTGTCTACAAGGGCTCAGTCAATGATCATGAGGTGATGATAAAGAGGATGAGGTTGGAAGACACACAACAGGTGATTGATTTACATTCTAAGATCAACCACATTAATATTGTGAACTTGCTTGGTGTTTGTTATGCTGTCGAGAGCAATGATGATTCATGGTCTTATTTAGTTTTTGAGTTGCCTAAGAATGGATGCTTGAGGGAGTGCTTATCTGATCAACGCAACCCTCTAAATTGGTACAAAAGGGCACAAATAGCCTTTGATATTGCAACATGTCTTTACTATTTACACTTCTGTTCTTTTCCTTCCTATGCTCACATGAATATTAGTAGTAGAAATATATTCATAACAGCAAACTGGAGGGCAAAACTGGCAGATGTTGGAAGTGCATTAGCTGCTAATGCCACACTCATCACCAAAAGAAATGATGCTATGGACATTCCAAAAGGATTGGTGGCACCAGAGTTTCTCTTACATGGCTTGGTTTCTGAAAAAGTGGACATTTTTTCATTTGGGGTTATTTTGCTTGAGTTGATCTCAGGAAGGGACAACTTTGATGATGGAAAACCAATCAAAGATTCCCTTGGATTTTTGTTGGGGGAAGCCAGTGAAGGGGGTTGTTTTGAAGGGTTAAAGAGTTTCATGGATCCTAATCTGAAGGATTACTCTATTCCAGAGGCTTTATGTTTGTCTTTCTTAGCAAAAGATTGTGTGGCAGATGATCCACTGCATAGGCCAACTATGGATGATATAATGAAAGTTCTTGCAAAAATGGTTTAG 1941 0.4019 MCLNRRKDLVPDIVADNTHKILNMFGACSAQLSYDQNNCTSNETGQGTRYSCKSAQDSCRTFLVYRANNHFNTISEVSKLFNMNSDEVLQKNNLTPSSLYHVLKQGKEVLIPVNCTCSGKYFQASLSYKVLHNTTYSEVACGVFEGLLKYLTLAEENPSQGSNKLEAGSELHVPLLCACSESYNLTRSMKVKYLVTYPLILEDDPDKLSKKFGISTEDFFAANSLNTWSTVYPDTIVLVPLKDGPIRILDIPDSPPPPPDFLPTKPVFVTEPSTQPSNLYIAGSIIGFFLFMTLLASGLYMKRMRKSDVVHSFSQTNSLTLWSPIRSSHASTQTGKSSTTWCLSPDLLVGIKYYLLNYSMEELKKATKNFSEENKICHNQGRDGGDFVYKGSVNDHEVMIKRMRLEDTQQVIDLHSKINHINIVNLLGVCYAVESNDDSWSYLVFELPKNGCLRECLSDQRNPLNWYKRAQIAFDIATCLYYLHFCSFPSYAHMNISSRNIFITANWRAKLADVGSALAANATLITKRNDAMDIPKGLVAPEFLLHGLVSEKVDIFSFGVILLELISGRDNFDDGKPIKDSLGFLLGEASEGGCFEGLKSFMDPNLKDYSIPEALCLSFLAKDCVADDPLHRPTMDDIMKVLAKMV 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0544 646 Pfam Protein tyrosine and serine/threonine kinase 395 640 IPR001245 GO:0004672|GO:0006468
Aed5g0544 646 Gene3D Phosphorylase Kinase; domain 1 351 446 - -
Aed5g0544 646 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 21 645 - -
Aed5g0544 646 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 21 645 - -
Aed5g0544 646 ProSiteProfiles Protein kinase domain profile. 289 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0544 646 Gene3D Transferase(Phosphotransferase) domain 1 449 646 - -
Aed5g0544 646 SUPERFAMILY Protein kinase-like (PK-like) 352 642 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0544 Aed-Chr5 3980468 3982812 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0544 21 646 Receptor kinase-like Gene Family AT2G23770 28.682 4.83e-70 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aed5g0544 PK_Tyr_Ser-Thr 2.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0544 - - gmx:100818937 1052.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0544 5 3980468 3982812 Aed5g0544 5 3980468 3982812 ECH