Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0512 ATGCATATGTCGTTTTCGTCATTATCAAAGATTTTTATTTTATTTCTTAGGGTGAGAAATAGTTCAATCACATTAGGATTCAAGCTCCAGATGCTCGATAAGACTCTTTCTTTTGCGATGGGGTGCTGTAGTTGCTTTGGGTTCATAAGGACACCTAATCGTCAAAGTCAAAGGTCTAAGTCTGCCACTAACAATAATCTCTACCAGGAGCCTCTGTTGGATGATGACGTTGAAGATGAAGAGGATGAGCCTATGTATAATGATGAGGTCACTAACATTAGTGGAGATGAAGGCCAGGAGGAAACTCGCCCCAAGCGGTCAGAAGAAATTTTGAACTTGAGAGTAGAGAATGGCATGATTTGTAGGCAGTTTCCCGTTAAGGAGACTCACAAACTTGTTCGCACCGAGGATGAAAATGGGAACAAGATGATAAATGAATATATTCGTGAGTATAAGATTGGTTCTGGTAGCTACGGGAAAGTGGCTCTTTATCGAAGCTCTGTCGATGGAAAGCATTATGCAATTAAGGCCTTTCATAAATCTCATTTACTGAAGCTTCGAGTTGCACCCTCAGAAACTGCCATGATGGATGTACTACGGGAGGTTCTCATTATGAAAATGCTGGAACATCCTAATATAGTTAACCTCATTGAGGTGATTGATGACCCAGAGTTGGACAACTTCTACATGGTTCTTGAATATGTGGAAGGTAAATGGGTTTGTGAGGGTTCAGGTCCCACTTGTGGCTTAGGTGAAGAGACTGCTAGGAGATACTTGCGTGATATAGTTTCTGGATTAACATATCTCCATGCTCATAATATAATACATGGGGATATTAAACCAGATAACCTGTTGATTACTCGTCATGGTACTGTAAAAATAGGGGATTTCAGTGTCAGCCAGGCTTTTGAGGATGATAATGATGAGCTTCGTCGGTCACCTGGCACTCCTGTTTTCACTGCACCAGAATGTATTTTAGGTGTGACCTATGGCGGTAGAGGTGCAGACACATGGGCAGTAGGAGTTACTTTATACTGTATGATATTGGGTGAATATCCTTTTCTTGGAGACACACTTCAAGATACATATGACAAAATAGTCAATAATCCTTTAGCACTCCCCAATGATCTGAATCCGCCATTGAAGAACTTAATAGAAGGATTACTTTCCAAAGACCCAAAATTAAGGATGACTTTGGGTGATGTTGCGGAAGATAGCTGGGTTATTGGAAATGATGGACCAATTCCTGACTACCTTTGTTGGTGCCAAAGGAAGAGCTTGGTAATTGAGGACAATGATGAGACCAATACTGACTAA 1317 0.4093 MHMSFSSLSKIFILFLRVRNSSITLGFKLQMLDKTLSFAMGCCSCFGFIRTPNRQSQRSKSATNNNLYQEPLLDDDVEDEEDEPMYNDEVTNISGDEGQEETRPKRSEEILNLRVENGMICRQFPVKETHKLVRTEDENGNKMINEYIREYKIGSGSYGKVALYRSSVDGKHYAIKAFHKSHLLKLRVAPSETAMMDVLREVLIMKMLEHPNIVNLIEVIDDPELDNFYMVLEYVEGKWVCEGSGPTCGLGEETARRYLRDIVSGLTYLHAHNIIHGDIKPDNLLITRHGTVKIGDFSVSQAFEDDNDELRRSPGTPVFTAPECILGVTYGGRGADTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNNPLALPNDLNPPLKNLIEGLLSKDPKLRMTLGDVAEDSWVIGNDGPIPDYLCWCQRKSLVIEDNDETNTD 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0512 438 ProSiteProfiles Protein kinase domain profile. 147 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0512 438 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 31 438 - -
Aed5g0512 438 Pfam Protein kinase domain 149 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0512 438 Gene3D Transferase(Phosphotransferase) domain 1 246 414 - -
Aed5g0512 438 Gene3D Phosphorylase Kinase; domain 1 141 243 - -
Aed5g0512 438 CDD STKc_LKB1_CaMKK 153 408 - -
Aed5g0512 438 MobiDBLite consensus disorder prediction 56 70 - -
Aed5g0512 438 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 31 438 - -
Aed5g0512 438 SUPERFAMILY Protein kinase-like (PK-like) 138 416 IPR011009 -
Aed5g0512 438 ProSitePatterns Protein kinases ATP-binding region signature. 153 176 IPR017441 GO:0005524
Aed5g0512 438 MobiDBLite consensus disorder prediction 72 87 - -
Aed5g0512 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 274 286 IPR008271 GO:0004672|GO:0006468
Aed5g0512 438 SMART serkin_6 147 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0512 438 MobiDBLite consensus disorder prediction 56 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0512 Aed-Chr5 3687237 3692466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0512 153 415 CBL-interacting serine-threonine protein kinases AT5G35410 34.848 8.70e-45 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Aed5g0512 Pkinase 9.6e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0512 K00908 - gmx:100789178 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0512 5 3687237 3692466 Aed5g0512 5 3687237 3692466 ECH