Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0499 ATGGGGAAGAAAGACAGAATCGTTCTTCCACCGGAGCTTCCGCCGGAGATCCCGGACGACGAAGTTGAAGTTTCCGACGATGACTTCCAATATTTCCAGGAGAACCGCGGCCATGCCTCAGTGCTTTCCACAATGGACACTCACTCAATCACCAAGCATGTTACTCGTGTTGCTGATGCCAAAGATGATGCATTGGAAAAACTTTATGAGAAACGCATGCAAAGGAATGCTCTCAAGAAAGAAAAAGAAGACGTTGGTTTGCAGGTTGATCGTGTAGATGCACTTCCAATCAAGACATTGGATGGAAAACTCCATTACCGGACAGCTACAAAGATGAGATTGGAAAATGATCAAAGTGAAGAGGGAACTGGAGAGGATGTCAATGCGGACAAAGGTATGGTGAAGCTAACTAAGGCTGAAAAGAGAGCCAAACTTAAGAAAGTGAGAAAAGAGGCAAAAAAACAAGGGAATGAGGTGGCTAAAGAAGAAGTGGAAGAGACACCGCAAGCAGCAGTACTGGCTGAGGTAAAAGAAGATCTTACAGCTGAGGAGGCCTTTGAAATTAAGAAGTGTAAACTTGCAGAATTGGGGAATGCCTTGCTTACAGATCCAGAGTCCAATATTAAATTTCTGAAGGACATGGTGCAGATATCTAAAGATAATGATCATACCATTGTTAAACTTGGACTTCTATCCCTCTTGGCTGTTTTCAAAGATATTATCCCTGGCTACCGGATCAGGCTTCCTACTGAAAAGGAACTAGAAATGAAGGTTTCGAAGACTGTTAGAAAGACGCGCTATTATGAGTCAACTCTTCTTTCAGCATACAAGGTATACTTGCAAAGGCTGATAGCCTTAGAAAAGAAGCCTTTATTTCAGCATGTAGCAGTTCGTTGTATTTGTTCTTTGCTTGATGCAAATCCCCATTTCAACTTTCGTGAAAGTTTGTTGGATGCTACTGTCAGAAACATAAGCTCTACTGATGATGCTATAAGGAAACTTTGTTGTTCTGCAATTAAATCACTCTTTACAAATGAGGGTAAACATGGGGGTGAAGCTACTGTGGAGGCTGTTCGATTGATTGCCTATCATGTTAAAGCTCATAATTGTCAAATGCACCCAGATTCTGTTGATGTTTTCTTGTCCCTTTCATTTGATGAGGATATTGTGAGGTCTGCAAAGATAGAAGAGGAACAAAAATTAAAAAACAAGAAAAATAAGAAAAGGAAAAACCCTGAGGCATCAAATCAGTTGGAGAATGATAGAAAGAAAAGTAGGAAAGAATCAATTTCCAAGACAAGAGTTGAGGTTGAAGCTGATTACAAGGCTGCATCCTTGGCCCCTGATGTTATGGAGAAGAGACATATGCAAACTGAAACACTCTCTGCTATCTTCGAGACATACTTTCGCATTTTGAAGCATACAATGCAGTCCATACGTGCCAGGCCTGAAGCCAATGCTGGGGCATTATCAACTGCAGTGGAACCTATCCCTATGCTTGCTCCATGTCTGAAAGGACTGGCAAAATTTTCACATCTGATTGACCTTGATTTCATGGGTGATCTAATGAACCATCTCAAACTACTTGCTGCTGGAAATATCAACTCAGGCAACACTTCTGACAAGTGTTCTAAATGTTTGACCATATCTGAACGCCTCCAGTGTTGCATTGTTGCTTTTAAAGTGATGAGGCACAATCTTGATGCCTTGAATGTTGATTTACAAGACTTCTTTCTCCATCTTTACAATCTTGTGCTTGAATACAGACCAGGAAGAGATCAAGGAGAGGTGTTGGCAGAAGCTTTGAAGATAATGTTGTGTGATGATAAGCAACATGACATGCAAAAGACTGCTGCATTTGTAAAACGATTAGCAACATTTTCACTGTGTTTTGGATCTGCAGATTCCATGGCTGCCTTGGTCACAGTAAAGCATCTCCTTCAGAAGAATGTTAAGTGCAGAAATTTGTTGGAAAATGACATTGGAGGGGGCTCTGTTTTTGGCACAATTCCTAAATATCTACCATATTCCACAGACCCCAATTTGAGTGGTGCCCTTGCCTCGGTACTTTGGGAACTCAGTCTTCTGTCCAAGCATTATCATCCGGCTATATCAACACTGGCCTCGGGCATTTCAAGCATGAGTACTGCACATAATCAGGCCCTTTTATCCAAGTCCTCTCCTCAACTAGCTTTTAGTGAAATGTCTCTGGACAAGGAATTATGTTTCACACAAAAGAATGACAGTATAATAAAATTAAATAATAAGAAGAAACGAGCAAGTGACTCTGCTATATCACCTTCCATTGGTTCTACAACAGTTACAAGTTCATTTGATGACAATGAGTTGCAAAGGAAACTTAGCTCCCATTTTATGCTTCTTCATGATATAAAGGAGAATGAAAGGTTGAGAAAGGAGTTGGATAGGACTGCTCTATCACTACAGCTATATGAACAATACAAGAAACAAAAGAAACGATCAAAACCAAGTAGATGA 2496 0.4058 MGKKDRIVLPPELPPEIPDDEVEVSDDDFQYFQENRGHASVLSTMDTHSITKHVTRVADAKDDALEKLYEKRMQRNALKKEKEDVGLQVDRVDALPIKTLDGKLHYRTATKMRLENDQSEEGTGEDVNADKGMVKLTKAEKRAKLKKVRKEAKKQGNEVAKEEVEETPQAAVLAEVKEDLTAEEAFEIKKCKLAELGNALLTDPESNIKFLKDMVQISKDNDHTIVKLGLLSLLAVFKDIIPGYRIRLPTEKELEMKVSKTVRKTRYYESTLLSAYKVYLQRLIALEKKPLFQHVAVRCICSLLDANPHFNFRESLLDATVRNISSTDDAIRKLCCSAIKSLFTNEGKHGGEATVEAVRLIAYHVKAHNCQMHPDSVDVFLSLSFDEDIVRSAKIEEEQKLKNKKNKKRKNPEASNQLENDRKKSRKESISKTRVEVEADYKAASLAPDVMEKRHMQTETLSAIFETYFRILKHTMQSIRARPEANAGALSTAVEPIPMLAPCLKGLAKFSHLIDLDFMGDLMNHLKLLAAGNINSGNTSDKCSKCLTISERLQCCIVAFKVMRHNLDALNVDLQDFFLHLYNLVLEYRPGRDQGEVLAEALKIMLCDDKQHDMQKTAAFVKRLATFSLCFGSADSMAALVTVKHLLQKNVKCRNLLENDIGGGSVFGTIPKYLPYSTDPNLSGALASVLWELSLLSKHYHPAISTLASGISSMSTAHNQALLSKSSPQLAFSEMSLDKELCFTQKNDSIIKLNNKKKRASDSAISPSIGSTTVTSSFDDNELQRKLSSHFMLLHDIKENERLRKELDRTALSLQLYEQYKKQKKRSKPSR 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0499 831 MobiDBLite consensus disorder prediction 400 432 - -
Aed5g0499 831 PIRSF Noc3 2 826 IPR016903 -
Aed5g0499 831 Pfam Nucleolar complex-associated protein 189 279 IPR011501 -
Aed5g0499 831 MobiDBLite consensus disorder prediction 410 432 - -
Aed5g0499 831 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 2 778 IPR016903 -
Aed5g0499 831 SUPERFAMILY ARM repeat 202 590 IPR016024 -
Aed5g0499 831 Coils Coil 138 165 - -
Aed5g0499 831 MobiDBLite consensus disorder prediction 1 22 - -
Aed5g0499 831 Coils Coil 404 424 - -
Aed5g0499 831 Pfam CBF/Mak21 family 553 708 IPR005612 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0499 1 807 Core DNA Replication Machinery Family AT1G79150 58.859 0.0 903
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0499 K14834 - gmx:100776136 1375.53