Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0471 ATGGATCGGTTCATAGCAAACTTGCCGCCAATGGATCTGATGCGCTCCGAGACGATGACGTTCGTTCAGCTCATCATCCCCGCCGAGTCCGCTCACCGCGCCATCACCTATTTAGGCGAACTCGGCCTCCTTCAATTCCGCGACTTAAATGCTGAAAAAAGCCCCTTCCAGAGAACATTTGTTAACCAGGTAAAGCGGTGTGCAGAAATGTCAAGAAAGCTACGATTCTGCAAGGATCAAGTCAATAAAGCTGGTCTAATGTCTTCTCATTCAGCCTTGCAATCAGATATTTATCTGGAGGATCTAGAGATACAACTTGCTGAGCATGAACATGAGCTAATTGAAATGAACTCTAACAGTGAGAAACTTCGGCAATCATATAATGAACTCCTGGAGTTCAAGATTGTATTACAAAAGGCATGTGGTTTTCTTGTTTCAAGTCATGGCAACACTGTTTCAGAAGAGAGGGAACTGGAGGAGAATGTTTTCTCAAATGGAGAGTATATTGAGACACCATTTTTGTTTGAACAGGAAATTAGGCCTGCACCATCAAATCAATCTGGTTTAAGATTTATCAGTGGGATAATTTGTAAATCCAAAGTTCTTAGGTTTGAAAGGATGCTGTTTCGTGCTACAAGAGGCAATATGCTTTTCAATCAGGCACCGGCTGATGAACAAATCATGAATCCTATTTCAACTGAGATGGTTGAAAAAATTGTGTTTGTTGTGTTTTTCTCTGGGGAGCAAGCAAGAATGAAGATTCTGAAAATTTGTGATGCATTTGGTGCAAATTGTTACCCTGTTCCTGAAGATATTAGTAAACAGAGGCAAATAACTTTGGAGGTTTCATCCCGTCTTGCCGACTTAGAGGCAACTCTGGATGCTGGGATTAGGCATCGGAATAAGGCTCTAGCTTCTGTAGGAGGCCATTTAACAAAATGGATGGACATGGTAAGAAGAGAGAAGGCTGTGTATGATACACTGAACATGTTAAATTTTGATGTCACCAAAAAATGTCTTGTTGGAGAGGGCTGGTGCCCTATATTTGCAAAAGCACAGATTCAGGAGGCACTGCAACGTGCAACTCTTGACAGCAGTTCTCAAGTTGGCATAATCTTTCATTCAATGGATGCACTGGAATCACCACCTACATATTTTAGGACCAATAAAGCAAATCCTGCAGTTTATACAACTATTATATTCCCATTTCTTTTTGCGGTTATGTTTGGTGACTGGGGTCATGGAATTTGCCTGTTGCTGGGAGCATTGGTTCTTATAGCACGTCAAAGCAAGCTCAGCACTCAGCGACTTGGAAGCTTTATGGAGATGCTATTTGGTGGGCGCTATGTGCTACTTTTGATGTCACTATTTTCAATCTATTGTGGGTTAATCTACAACGAGTTCTTCTCTATTCCTTATCACATATTTGGTGCATCTGCTTACAAATGCCGAGATAGTTCGTGCAGGGATGCACATACTACTGGGTTAGTAAAATACCGAGAACCATATCCATTTGGTGTGGATCCCAGTTGGCGAGGAAGTCGTTCAGAATTGCCTTTTCTAAACTCTCTCAAGATGAAGATGTCCATTCTGTTTGGTGTGGTGCACATGAACTTGGGAATTATTTTAAGTTATTTCAATGCTTGTTTCTTTAGCAACTCCCTGGATATAAGGTTCCAGTTTGTGCCACAGATGATTTTCCTTAACTCTCTATTTGGGTATCTTTCTCTTCTCATTGTTGTCAAGTGGTGTTCTGGCTCTCAGGCAGACCTTTATCATGTAATGATTTACATGTTTTTAAGCCCTTTTGACAATCTTGGTGAGAATCAATTGTTCTGGGGCCAAAGGCCACTTCAAGTTGTGTTATTGCTCTTGGCTTTAATTGCAGTTCCGTGGATGCTCTTTCCAAAACCTTTTATACTAAAGAAGCTTCATAATGAGAGATTTCAAGGACGCACTTATGGTATGCTTAATACTGCTGAGGTTGATCTTGAGTTGGAACCAGATTCTGCCAGGCAACATCATGATGAATTCAATTTCAGCGAGGTCTTTGTTCACCAAATGATTCACTCCATTGAGTTTGTTCTAGGTTCAGTTTCAAATACAGCCTCATATCTACGACTTTGGGCATTAAGCTTGGCTCACTCAGAACTTTCTACCGTTTTTTATGAGAAAGTCCTGCTACTTGCTTGGGGGTATGACAATCTTGCCATTCGGTTAGTGGGGCTAGCTGTTTTTGCCTTTGCAACTGCCTTTATACTACTAATGATGGAGTCTCTCAGTGCTTTTCTTCACGCTTTGCGTCTTCACTGGGTAGAGTTTCAAAGTAAATTCTACAGCGGTGATGGATACAAGTTCAATCCTTTTTCCTTTGCCTCCTTAACAGAGGATGAAAATTGA 2400 0.4117 MDRFIANLPPMDLMRSETMTFVQLIIPAESAHRAITYLGELGLLQFRDLNAEKSPFQRTFVNQVKRCAEMSRKLRFCKDQVNKAGLMSSHSALQSDIYLEDLEIQLAEHEHELIEMNSNSEKLRQSYNELLEFKIVLQKACGFLVSSHGNTVSEERELEENVFSNGEYIETPFLFEQEIRPAPSNQSGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAPADEQIMNPISTEMVEKIVFVVFFSGEQARMKILKICDAFGANCYPVPEDISKQRQITLEVSSRLADLEATLDAGIRHRNKALASVGGHLTKWMDMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKAQIQEALQRATLDSSSQVGIIFHSMDALESPPTYFRTNKANPAVYTTIIFPFLFAVMFGDWGHGICLLLGALVLIARQSKLSTQRLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSIPYHIFGASAYKCRDSSCRDAHTTGLVKYREPYPFGVDPSWRGSRSELPFLNSLKMKMSILFGVVHMNLGIILSYFNACFFSNSLDIRFQFVPQMIFLNSLFGYLSLLIVVKWCSGSQADLYHVMIYMFLSPFDNLGENQLFWGQRPLQVVLLLLALIAVPWMLFPKPFILKKLHNERFQGRTYGMLNTAEVDLELEPDSARQHHDEFNFSEVFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLAIRLVGLAVFAFATAFILLMMESLSAFLHALRLHWVEFQSKFYSGDGYKFNPFSFASLTEDEN 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0471 799 PANTHER VACUOLAR PROTON ATPASES 5 798 IPR002490 GO:0033179|GO:0046961|GO:1902600
Aed5g0471 799 Pfam V-type ATPase 116kDa subunit family 37 791 IPR002490 GO:0033179|GO:0046961|GO:1902600
Aed5g0471 799 Coils Coil 99 126 - -
Aed5g0471 799 PIRSF ATP6V0A1 9 799 IPR026028 GO:0000220|GO:0046961
Aed5g0471 799 PANTHER VACUOLAR PROTON ATPASE A1 5 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0471 Aed-Chr5 3415281 3430972 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0471 1 792 Primary Pumps ATPases(2) AT2G28520 77.055 0.0 1282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0471 K02154 - gmx:100800799 1490.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0471 5 3415281 3430972 Aed5g0471 5 3415281 3430972 ECH
Aed1g1156 1 11271743 11281864 Aed5g0471 5 3415281 3430972 PCT