Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0469 ATGGCTGTTGAAATAATTGAACGAACAAGGTCCGTAGATCAGAGGCGGCTACGATCTGAGCCGTCATCGAGTCCCAAACGCATCACACGTGTGCGCGTGTGGTTCATTCAGTACAACATATTCGGAAACCTCTTCGAGGTTACGACGAAGTACCGTCCTCCGATCATGCCTATTGGACGCGGCGCGTACGGAATCGTTTGTTCGCTGTTGAATACTGAGACGAATGAGCTGGTAGCTGTTAAGAAGATAGCGAACGCTTTCGACAATCACATGGACGCGAAGCGCACGCTCCGTGAAATTAAGCTTCTTAGGCATTTGGATCATGAAAATGTAATTGGTTTGAGAGATGTTATTCCTCCACCATTGCGTAGAGAGTTTAGTGATGTCTATATAGCCACTGAACTCATGGACACTGATCTTCACCACATCATTCGCTCTAATCAAAGTCTGTCAGAGGAGCACTGCCAATACTTCTTGTACCAGATTCTTCGTGGGCTCAAGTATATACATTCTGCAAACATAATCCATAGAGATTTAAAACCGAGCAACTTGCTCCTGAATTCAAATTGCGACCTGAAGATTATTGATTTTGGTCTTGCACGACCAACTTTGGAAAATGACTTCATGACAGAATATGTAGTCACAAGATGGTACAGAGCTCCCGAATTGTTGTTGAACTCCTCTGATTACACATCTGCGATAGATGTGTGGTCTGTTGGTTGCATCTTCATGGAGCTTATGAATAAAAAGCCTCTCTTTCCGGGCAAAGACCATGTGCATCAGATGCGCCTATTGACAGAGCTTCTTGGCACCCCAACTGAGGCTGACCTTGGGTTAGTGAAAAATGAAGATGCGAGAAGATATATCAGACAACTTCCTCATTATCCTCGCCAACCTTTAGCTCAGGTCTTCCCCCATGTTCATCCCGCAGCCATGGATCTTGTTGATAAAATGTTGACCGTTGATCCCACTAAAAGAATTACAGTTGAAGAAGCACTAGCCCATCCATACCTTGAAAAACTGCATGATGTAGCTGATGAACCAATCTGCATGGAGCCATTTTCATTTGAATTTGAGCAACAGCAATTGGATGAAGAGCAAATAAAAGAGATGATCTACAGGGAAGCACTAGCACTCAATCCTGAGTATGCTTAA 1155 0.4398 MAVEIIERTRSVDQRRLRSEPSSSPKRITRVRVWFIQYNIFGNLFEVTTKYRPPIMPIGRGAYGIVCSLLNTETNELVAVKKIANAFDNHMDAKRTLREIKLLRHLDHENVIGLRDVIPPPLRREFSDVYIATELMDTDLHHIIRSNQSLSEEHCQYFLYQILRGLKYIHSANIIHRDLKPSNLLLNSNCDLKIIDFGLARPTLENDFMTEYVVTRWYRAPELLLNSSDYTSAIDVWSVGCIFMELMNKKPLFPGKDHVHQMRLLTELLGTPTEADLGLVKNEDARRYIRQLPHYPRQPLAQVFPHVHPAAMDLVDKMLTVDPTKRITVEEALAHPYLEKLHDVADEPICMEPFSFEFEQQQLDEEQIKEMIYREALALNPEYA 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0469 384 Gene3D Transferase(Phosphotransferase) domain 1 136 365 - -
Aed5g0469 384 SMART serkin_6 52 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0469 384 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 27 383 - -
Aed5g0469 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Aed5g0469 384 Pfam Protein kinase domain 57 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0469 384 Gene3D Phosphorylase Kinase; domain 1 35 375 - -
Aed5g0469 384 CDD STKc_TEY_MAPK 45 381 - -
Aed5g0469 384 ProSiteProfiles Protein kinase domain profile. 52 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0469 384 SUPERFAMILY Protein kinase-like (PK-like) 57 346 IPR011009 -
Aed5g0469 384 ProSitePatterns MAP kinase signature. 87 190 IPR003527 GO:0004707|GO:0005524|GO:0006468
Aed5g0469 384 ProSitePatterns Protein kinases ATP-binding region signature. 58 82 IPR017441 GO:0005524
Aed5g0469 384 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 27 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0469 Aed-Chr5 3403632 3406966 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0469 35 384 MAP Kinase Gene Family AT3G45640 85.143 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Aed5g0469 Pkinase 5.6e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0469 K20536 - gmx:100801339 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0469 5 3403632 3406966 Aed5g0469 5 3403632 3406966 ECH