Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed5g0466 | ATGTTAGATCTTAATCTCAATGCGGAGTGGACCGATTCGTTTAGTAACGGCGACTCGCCGTTACCGTTAGAGAAGTTTCCAGAAGGTTCGAGGAACCAAATGGCGGAGTCAGGGACTTCGAATTCCTCCGTGGTGAATGCGGACGGGTCGAGTAACGTCGGCGGTGACGAGGACTCTTGCTCCACGCGCGCTGATGACGTGTACACCTTCAATTTCGATATCCTTAAAGTGGAGGCCGCGAACGACGTCGTAACGAGGGAGCTCTTCCCGGTAGGTGGAGGAATGGCCACGACGTCGTTTTCAGCTAGGAATAGTTTTGTGGATCTCTCGTTCGATCGCAAGGGAGGGAACAGTGAGATGAAGATGCTTCAGACTCAGACTCAGACTTCGACGCAAACTCCGACTCCGACACCAACTCAGCAACCAGCGAAGAAGAGTAGGAGAGGACCAAGGTCTCGAAGCTCGCAATACAGAGGGGTTACTTTTTACAGAAGGACGGGAAGATGGGAATCGCATATCTGGGATTGCGGGAAACAAGTCTATTTGGGTGGATTTGACACGGCTCATGCTGCTGCCAGAGCCTATGATCGAGCTGCTATTAAGTTCAGGGGAGTTGATGCTGATATCAATTTCAATCTGAGTGATTATGAGGATGATCTTAAACAGACGAAGAATTTGTCCAAGGAGGAATTTGTACATATATTGCGTCGCCAAAGTACTGGTTTCTCAAGAGGAAGCTCTAAATACCGAGGAGTAACACTCCACAAATGTGGCCGGTGGGAAGCTCGAATGGGCCAACTACTTGGCAAAAAGGCTTATGACAAGGCAGCTATCAAATGCAACGGACGGGAAGCAGTGACCAACTTTGAGTCAAGTAGCAGTCAGAACCTTGATCTCAATTTGGGCATAGCGACCCCAGGACCTGTTCCCAAAGAAAATTGGGCGCAACTTCAGTTCCCTTCCATCCCTTACAACACACATGGTGGAAGAAGTTCAATGATAGAAACCAATTTTAATTCTGGAATTGGTAATCCATCTTTGGAAAGGATGGTTGTAACTGAAGATCGTCCTTTAGTATGGAATGGCATGTCTCCTAATTTCTTTCCCAATGAGGAGAGAATCGGCATTGATCCTTCAAAAGGACTCCCCAACTGGGCGTGGCAAACACATGGCCAGGTCAATGCTACTCCAGTACCAACGTTCTCTGCTGCAGCATCATCAGGATTCTCCTTTTCAGCTACCTTTCCTTCGACTGCCATCTTTCCAACAAGATCTATGAACTCAATTCCCCAGAGTCTCTGTTTTACTTCATCCAGCACGCCTACCAGCAATGCATCTGAATACTATTACCAGGTTAAGCCCCCGCAGGCACCACCATAG | 1380 | 0.4812 | MLDLNLNAEWTDSFSNGDSPLPLEKFPEGSRNQMAESGTSNSSVVNADGSSNVGGDEDSCSTRADDVYTFNFDILKVEAANDVVTRELFPVGGGMATTSFSARNSFVDLSFDRKGGNSEMKMLQTQTQTSTQTPTPTPTQQPAKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLSDYEDDLKQTKNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQLLGKKAYDKAAIKCNGREAVTNFESSSSQNLDLNLGIATPGPVPKENWAQLQFPSIPYNTHGGRSSMIETNFNSGIGNPSLERMVVTEDRPLVWNGMSPNFFPNEERIGIDPSKGLPNWAWQTHGQVNATPVPTFSAAASSGFSFSATFPSTAIFPTRSMNSIPQSLCFTSSSTPTSNASEYYYQVKPPQAPP | 459 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed5g0466 | 459 | MobiDBLite | consensus disorder prediction | 32 | 58 | - | - | |
Aed5g0466 | 459 | SUPERFAMILY | DNA-binding domain | 155 | 213 | IPR016177 | GO:0003677 | |
Aed5g0466 | 459 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 | 1 | 425 | - | - | |
Aed5g0466 | 459 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 1 | 425 | - | - | |
Aed5g0466 | 459 | MobiDBLite | consensus disorder prediction | 17 | 59 | - | - | |
Aed5g0466 | 459 | CDD | AP2 | 247 | 292 | IPR001471 | GO:0003700|GO:0006355 | |
Aed5g0466 | 459 | Gene3D | AP2/ERF domain | 247 | 291 | IPR036955 | GO:0003700|GO:0006355 | |
Aed5g0466 | 459 | Gene3D | AP2/ERF domain | 155 | 213 | IPR036955 | GO:0003700|GO:0006355 | |
Aed5g0466 | 459 | CDD | AP2 | 156 | 214 | IPR001471 | GO:0003700|GO:0006355 | |
Aed5g0466 | 459 | SUPERFAMILY | DNA-binding domain | 247 | 291 | IPR016177 | GO:0003677 | |
Aed5g0466 | 459 | MobiDBLite | consensus disorder prediction | 123 | 157 | - | - | |
Aed5g0466 | 459 | MobiDBLite | consensus disorder prediction | 123 | 145 | - | - | |
Aed5g0466 | 459 | ProSiteProfiles | AP2/ERF domain profile. | 156 | 212 | IPR001471 | GO:0003700|GO:0006355 | |
Aed5g0466 | 459 | Pfam | AP2 domain | 156 | 204 | IPR001471 | GO:0003700|GO:0006355 | |
Aed5g0466 | 459 | SMART | rav1_2 | 156 | 218 | IPR001471 | GO:0003700|GO:0006355 | |
Aed5g0466 | 459 | SMART | rav1_2 | 248 | 296 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed5g0466 | Aed-Chr5 | 3361096 | 3365922 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed5g0466 | 1 | 459 | AP2-EREBP Transcription Factor Family | AT5G60120 | 44.578 | 3.38e-103 | 314 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Aed5g0466 | AP2 | 6.5e-10 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed5g0466 | K09284 | - | gmx:100788303 | 786.178 |