Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0460 ATGGGTTGGTTTTGTTGCCCAGGGAACTCAAGCAAAAAATCGATTACCGAAGATTTTAGCGACACCCTCGACCAGAAACCCATCAATTCCACTGCCACAGATAGCGTCGTCAAAGTTGATTTCAAAGTGAATGGGAATAAGGAAGATGGTTCTAAAGGTGATCAACTTGCTCTGGATGTGAAGAGTTTAAATTTGAGAGAGGAGGTTTCTCAGGATGGAAAAGATAATGGCAATCGGGCACAGACATTCAGCTTTAACGAACTTGCAGCCGCAACTGGAAACTTCAAGCTGAATTGCTTTTTGGGTGAAGGAGGCTTTGGCAAGGTTTACAAGGGACACTTGGAGAGAATAAACCAGGTTTATATTCAGCCCGGTAGAAAACCACTTGATTGGAACACAAGAATGAAAATAGCAGCTGGCGCTGCAAGGGGTTTGGAGTATCTGCATGACAAAATGAAGCCTCCTGTAATATATCGTGACTTGAAATGTTCTAACATTTTGTTAGGTGAGGGATTTCATCCTAAGTTGTCCGATTTTGGCTTGGCAAAAGTAGGCCCGATTGGTGATAAGACCCATGTTTCAACAAGGGTTATGGGCACATATGGGTACTGTGCCCCAGATTATGCAATGACAGGTCAGTTGACATTCAAGTCAGATATTTACAGCTTCGGGGTTGTTCTTTTGGAGCTTATTACAGGCCGGAAAGCCATCGACCATACAAAACCTGCCAAAGAACAAAATCTAGTTGCATGGGCAAGACCTTTGTTCAGAGATAGGAAGAAATTTTCACAGATGGTTGACCCATTACTTGAAGGTCGATATCCCATGAGAGGCCTATACCAAGCTCTTGCCATTGCTGCTATGTGTGTTCAAGAGCAGCCTAATATGCGGCCGGTAATAGTTGACGTGGTTACGGCTCTTAATTACCTAGCTTCTCAGACGTATGATCCCCAATTTCATCACGCACAAACCTCTAGAAGAAGTCCACCTTCTCAAACAATGAAAAGGGATGATGATGATGATCATAGACATATTTTAAGCATAGAGCATGAGACAGACAGATCTTAA 1068 0.4298 MGWFCCPGNSSKKSITEDFSDTLDQKPINSTATDSVVKVDFKVNGNKEDGSKGDQLALDVKSLNLREEVSQDGKDNGNRAQTFSFNELAAATGNFKLNCFLGEGGFGKVYKGHLERINQVYIQPGRKPLDWNTRMKIAAGAARGLEYLHDKMKPPVIYRDLKCSNILLGEGFHPKLSDFGLAKVGPIGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDHTKPAKEQNLVAWARPLFRDRKKFSQMVDPLLEGRYPMRGLYQALAIAAMCVQEQPNMRPVIVDVVTALNYLASQTYDPQFHHAQTSRRSPPSQTMKRDDDDDHRHILSIEHETDRS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0460 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Aed5g0460 355 PANTHER OS07G0668900 PROTEIN 123 340 - -
Aed5g0460 355 PANTHER OS07G0668900 PROTEIN 2 120 - -
Aed5g0460 355 MobiDBLite consensus disorder prediction 331 355 - -
Aed5g0460 355 Gene3D Phosphorylase Kinase; domain 1 67 121 - -
Aed5g0460 355 Gene3D Transferase(Phosphotransferase) domain 1 122 345 - -
Aed5g0460 355 MobiDBLite consensus disorder prediction 318 355 - -
Aed5g0460 355 Pfam Protein kinase domain 131 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0460 355 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 123 340 - -
Aed5g0460 355 SMART serkin_6 95 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0460 355 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 2 120 - -
Aed5g0460 355 SUPERFAMILY Protein kinase-like (PK-like) 81 329 IPR011009 -
Aed5g0460 355 ProSiteProfiles Protein kinase domain profile. 1 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0460 Aed-Chr5 3297093 3301298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0460 122 312 Glycoside Hydrolase AT3G07070 64.921 1.96e-90 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Aed5g0460 Pkinase 2.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0460 - - gmx:100811821 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0460 5 3297093 3301298 Aed5g0460 5 3297093 3301298 ECH