Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0458 ATGGAGGCATTTCCAAGAGACCAACGTGGCTCGCTCGAAGTGTTCAACCCTTCTTCTTCTTACTCCGCCGAGAGTTCGCCGTTGCGTGCTCAATCCACGTGGAAGACGTGGATTGACTCACGCGACGGCGGCGAGCCACCGGAACAACAACAGCAGCAACAGCAACAGCAACGTGGCGGTGCCGACGAGGTTACCGCCACGTCATGGATGGCGCTCAAGGACTCCACTCCTCCGCCGCCGACGCTTGCCGCGGTGCTCGGTGATTCTGTGCAGCCTCCGGCGGAAGTAGGCACTGCGGCGAAGCGCGCTGCGGAGTGGGGTCTGGTTCTGAAGACGGACACGGAGACCGGGAAGCCGCAGGGAGTGGCGGTGCGGACCTCCGGCGGGGAGGAGCCGAGCGCCAAGGTGGCCGGAGGGTCGAGGAGGGACTCGAGCAACTCAGTTCGGAGCTCCGGCGAGTCGTCGGACGACGGGAGGGAGTACCGGGGGGGAATACCGAGGGTTTCGGAGGATCTGAGGGACGCTTTGTCGGCTTTTCAACAGACGTTCGTGGTTTCGGACGCTACCAAACCCGATTACCCGATCATGTATGCCAGTGCCGGGTTTTTCAAGATGACGGGTTATACGTCCAAGGAGGTGATAGGAAGAAACTGTCGGTTTATGCAGGGAGCAGACACGGATCCGGATGATGTGGCAAAGATAAGGGAAGCCTTACAAAGTGGGTCTACTTACTGTGGAAGGTTACTCAATTACAAGAAGGATGGCACCCCCTTTTGGAACCTTCTCACTATTGCCCCTATCAAGGACGATGATGGCAGAGTCCTCAAATTCATCGGAATGCAAGTAGAGGTTAGCAAGCATACAGAGGGGACTAAGGAGAAGATGCTACGTCCCAATGGATTGCCCGAATCCTTGATTCGATACGATGCTCGTCAGAAAGAGAAGGCAAACAGTTCAGTATCTGAGTTGTTGCTGGCTGTGAGGAGGCCTCGTGCACTGAGTGAATCAGCTGGGCGTCCCTTGATCAGAAAGTCAGAATCTGCATCCGGTGATGATGCACTTGCACAAGGCAAACCTGCAGAAAAGAATTTTGATGGCAAAGTAGTACGGAAGAAGAAGGAAAAGAGAAAGGGTCTTGATCTTGCTACCACACTCGAACGTATTGAGAAGAACTTTGTCATTACTGATCCAAGGCTGCCTGACAACCCCATTATCTTTGCATCTGATAGCTTCTTAGAGCTTACTGAGTATAGTCGTGAAGAAATCTTGGGAAGAAATTGCAGGTTTCTGCAAGGGCCTGAAACTGATCCAGCAACAGTGAGAAAAATTAGAGAGGCTATTGACAATCAAACCGACGTCACTGTGCAGCTCATTAATTATACAAAGAGTGGTAAAAAGTTCTGGAACTTGTTTCATTTGCAACCTATGCGTGATCAGAAGGGAGAGGTACAGTATTTTATTGGAGTTCAACTTGATGGCAGTCAACATGTGGAGCCTCTTCACAACCGCATTGCAGACAATACTGCAAAAGAGGGAGAACAATTGGTAAAAGAAACTGCTGAAAATGTTGATGATGCACTGAGAGAACTTCCAGATGCTAATATGAAACCTGAAGATTTATGGATGAATCATTCAAAAGTGGTTCACCCCAAGCCTCATAGGAGGGATGAAGCTGCTTGGAAAGCCATTCAGAAGATCCTAGAGAGTGGAGACCAGATAGGGTTGAATCATTTTAGGCCAGTTAAACCTTTGGGATCAGGAGATACTGGCAGTGTCTATCTGGTGGAGCTATGTGAAACTGGTCATTATTTTGCCATGAAGGCTATGGAGAAGGGTGTTATGCTCAATCGTAACAAGGTGCATAGAGCTTGCACAGAGAGAGAGATCCTCGACATGTTGGACCACCCTTTTCTTCCTGCATTATATGCTTCCTTTCAGACCAAGACACATGTTTGTTTGATAACTGATTATTGTTCTGGTGGAGAACTATTCCTTCTTCTTGACCGACAGCCAGCTAAGGTTCTCAGGGAAGATGCTGTGAGATTTTATGCCGCTGAAGTAGTTGTTGCGTTGGAGTATCTTCACTGCCAAGGAATAATATATCGGGATTTGAAGCCAGAAAATGTGTTACTCCAGGGCAGTGGACATGTGTCTCTAACAGATTTTGATTTGTCATGTTTAACATCTTGCAAACCACAGCTTCTAGTTCCAGCTGTAAGTGAAAAGAAGAAAGCTCAGAAAGGCCTACAGGCTCCAATATTTATGGCTGAGCCTATGAGAGCATCAAACTCTTTTGTGGGCACAGAAGAGTACATAGCTCCGGAAATTATAACGGGTTCAGGCCATACAAGTGCTGTGGATTGGTGGGCTCTAGGAATTCTTCTGTATGAAATGTTTTATGGGTATACACCATTCAGGGGAAAGACTAGGCAAAGAACATTTACAAATATTCTGCACAAGGACCTTAAATTTCCCAAAAGTAAACAGGTAAGTTTCAGTGCAAAGCAGTTAATGTACCGGTTGTTGAACAGAGAGCCGAAGGGCAGATTGGGTTCAAGAGAAGGAGCAAATGAAATTAAGAACCATCCGTTCTTTCGGGGTGTCAATTGGGCCCTTGTTCGTTGCACGAAACCTCCTGAGCTTGATGCTCCTATCTTGGAGACAACTGAAGAAGAAGGAGGAGAAAAGGAACCCAAATTTGAAGATCAAGTGCAACAAGAGGAGATGAACGTCTTCTGA 2739 0.4801 MEAFPRDQRGSLEVFNPSSSYSAESSPLRAQSTWKTWIDSRDGGEPPEQQQQQQQQQRGGADEVTATSWMALKDSTPPPPTLAAVLGDSVQPPAEVGTAAKRAAEWGLVLKTDTETGKPQGVAVRTSGGEEPSAKVAGGSRRDSSNSVRSSGESSDDGREYRGGIPRVSEDLRDALSAFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFMQGADTDPDDVAKIREALQSGSTYCGRLLNYKKDGTPFWNLLTIAPIKDDDGRVLKFIGMQVEVSKHTEGTKEKMLRPNGLPESLIRYDARQKEKANSSVSELLLAVRRPRALSESAGRPLIRKSESASGDDALAQGKPAEKNFDGKVVRKKKEKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNRIADNTAKEGEQLVKETAENVDDALRELPDANMKPEDLWMNHSKVVHPKPHRRDEAAWKAIQKILESGDQIGLNHFRPVKPLGSGDTGSVYLVELCETGHYFAMKAMEKGVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHVCLITDYCSGGELFLLLDRQPAKVLREDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGSGHVSLTDFDLSCLTSCKPQLLVPAVSEKKKAQKGLQAPIFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMFYGYTPFRGKTRQRTFTNILHKDLKFPKSKQVSFSAKQLMYRLLNREPKGRLGSREGANEIKNHPFFRGVNWALVRCTKPPELDAPILETTEEEGGEKEPKFEDQVQQEEMNVF 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0458 912 MobiDBLite consensus disorder prediction 45 74 - -
Aed5g0458 912 Gene3D Phosphorylase Kinase; domain 1 577 661 - -
Aed5g0458 912 Gene3D PAS domain 367 530 - -
Aed5g0458 912 MobiDBLite consensus disorder prediction 336 363 - -
Aed5g0458 912 MobiDBLite consensus disorder prediction 889 904 - -
Aed5g0458 912 ProSiteProfiles PAC domain profile. 242 296 IPR000700 -
Aed5g0458 912 SUPERFAMILY Protein kinase-like (PK-like) 560 885 IPR011009 -
Aed5g0458 912 SMART pac_2 454 496 IPR001610 -
Aed5g0458 912 SMART pac_2 245 287 IPR001610 -
Aed5g0458 912 Gene3D PAS domain 182 338 - -
Aed5g0458 912 ProSiteProfiles PAC domain profile. 451 505 IPR000700 -
Aed5g0458 912 Gene3D Transferase(Phosphotransferase) domain 1 662 877 - -
Aed5g0458 912 ProSiteProfiles PAS repeat profile. 168 239 IPR000014 -
Aed5g0458 912 Coils Coil 509 529 - -
Aed5g0458 912 SMART pas_2 170 240 IPR000014 -
Aed5g0458 912 SMART pas_2 379 448 IPR000014 -
Aed5g0458 912 ProSitePatterns Protein kinases ATP-binding region signature. 584 607 IPR017441 GO:0005524
Aed5g0458 912 CDD PAS 392 492 IPR000014 -
Aed5g0458 912 ProSiteProfiles PAS repeat profile. 377 450 IPR000014 -
Aed5g0458 912 CDD PAS 195 284 IPR000014 -
Aed5g0458 912 MobiDBLite consensus disorder prediction 12 38 - -
Aed5g0458 912 SUPERFAMILY PYP-like sensor domain (PAS domain) 393 492 IPR035965 -
Aed5g0458 912 ProSitePatterns Serine/Threonine protein kinases active-site signature. 699 711 IPR008271 GO:0004672|GO:0006468
Aed5g0458 912 PANTHER FLIPPASE KINASE 1-RELATED 115 340 - -
Aed5g0458 912 PANTHER FLIPPASE KINASE 1-RELATED 361 903 - -
Aed5g0458 912 SUPERFAMILY PYP-like sensor domain (PAS domain) 189 281 IPR035965 -
Aed5g0458 912 Pfam PAS domain 400 492 IPR000014 -
Aed5g0458 912 Pfam PAS domain 189 285 IPR000014 -
Aed5g0458 912 ProSiteProfiles Protein kinase domain profile. 578 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0458 912 Pfam Protein kinase domain 581 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0458 912 MobiDBLite consensus disorder prediction 1 86 - -
Aed5g0458 912 SMART serkin_6 578 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0458 912 MobiDBLite consensus disorder prediction 887 912 - -
Aed5g0458 912 TIGRFAM sensory_box: PAS domain S-box protein 195 289 IPR000014 -
Aed5g0458 912 TIGRFAM sensory_box: PAS domain S-box protein 402 492 IPR000014 -
Aed5g0458 912 MobiDBLite consensus disorder prediction 110 165 - -
Aed5g0458 912 PANTHER PHOTOTROPIN-1 115 340 - -
Aed5g0458 912 PANTHER PHOTOTROPIN-1 361 903 - -
Aed5g0458 912 CDD STKc_phototropin_like 577 884 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0458 Aed-Chr5 3280038 3291733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0458 8 902 AGC Kinase Gene Family AT5G58140 56.660 0.0 1060
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aed5g0458 Pkinase 2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0458 K20715 - gmx:100804524 1548.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0458 5 3280038 3291733 Aed5g0458 5 3280038 3291733 ECH
Aed1g1168 1 11381934 11394390 Aed5g0458 5 3280038 3291733 PCT