Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0453 ATGTACTCTCATCACGGCAACGCCTCGTTTTCACGCGCTGCCGGCTCCTCCCTGGGCCATTTTCTCTGTCCCCCGGACGCATCGCCAATGCAGTATGCTGCCGCCGGCGCCACCGCTCTTCCTCAGGCGCAGCAGCAACTCGGCCACCACCACGGCGAGTTCGACTCGCTGCAGGAACTCAACTCGGATAACACGTACAACAGCTGCAGCAGCGGGTGCACTAGCTACATGGGGTCGCCGAGTTCGCTGGCGAGTTACGAGAGTCGACGAGTGCAGAGGAGCGCTAGCAGCCACTCGCTGCAGAAGAATGGTGGGACCCACCACCCCTTTTCGCCTCTTTTCGCTGAGTTGATTGACTCGGAAAACGCTCCTGTACGGAGAGCTTGCAGTACTGGTGACCTTCAGAGATTCAATGGGATGCAACATTTTCATCATTCTGATAGCTCATTGTCAAGTGAGAGTAGTTTGATCATTGAAGAAATGAGCAGAACCAGTCCTTACAGCCCAGAGGAGAAGAAGGTGAGAATTGAGAGATACAGGAACAAGAGAAACCAGAGGAACTTCGGCAAGAAAATTAAGTGGAGCCACGACATGGGTACTGGAGAGGAAGAGGATGATGAAGAAGAGAATTGGGCCAATTTCTTTAATTCCTTAGTTCCTGCAAATATTGCTGCTCAGGAGCCTCACGGCAGCAATAGTTCCTCCTTTGGTGTGTTCTATTAA 723 0.5242 MYSHHGNASFSRAAGSSLGHFLCPPDASPMQYAAAGATALPQAQQQLGHHHGEFDSLQELNSDNTYNSCSSGCTSYMGSPSSLASYESRRVQRSASSHSLQKNGGTHHPFSPLFAELIDSENAPVRRACSTGDLQRFNGMQHFHHSDSSLSSESSLIIEEMSRTSPYSPEEKKVRIERYRNKRNQRNFGKKIKWSHDMGTGEEEDDEEENWANFFNSLVPANIAAQEPHGSNSSSFGVFY 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0453 240 MobiDBLite consensus disorder prediction 84 108 - -
Aed5g0453 240 PANTHER CCT MOTIF PROTEIN 192 240 - -
Aed5g0453 240 PANTHER CCT MOTIF PROTEIN 51 194 - -
Aed5g0453 240 MobiDBLite consensus disorder prediction 84 106 - -
Aed5g0453 240 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 192 240 IPR045281 GO:0009909
Aed5g0453 240 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 51 194 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0453 Aed-Chr5 3206018 3208839 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0453 - - gmx:102667610 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0453 5 3206018 3208839 Aed5g0453 5 3206018 3208839 ECH
Aed1g1173 1 11427625 11430014 Aed5g0453 5 3206018 3208839 PCT