Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0444 ATGCCAAGGAAAGGAATGAGAAGCATTTTCTTCAGGCCATCACCAACTCCGTCATCGCTACCACCTCCCTCCCCTCGACGCACTTTCTCTGACTCCTTAATGGACGAAAACTTACAAACCGCAGAGACGCTCATAACCAAATGGGACGATTCCAACGCTAATTACCAATCCAAAATCCCAACGCCTCTTTTCAGCGGCACGCGTCAGGAAGCCAAACAGTACCTAAACGCGGTGAAGGGACTACAATCCGCTATGCAGTACCTCGTCGCACAGGATTCCTCCTCCAGCACACTCGTGCGCGCGCAGTTCCTAATGCAACTTGCCATGAAGACGCTCCAGAAAGAGTTCTACCAGATTCTATCCTCCAACAGAGAACACCTGGATCCCGAAACCGTCTCCACGCGCTCCTCCGTCGACCAACGCAGCGTCTCCGACTACGTGTCTGATTACGACGACGAAGTCTCAATCACCGAGGACGAATTCCGCGTCTCCGAGACCGAGCGAGTTTCCATGCTGGCCATGGAGGATTTGAAAGCCATAGCTGAATGCATGATTTCCTCCGGCTACGGGAAAGAGTGCGTCCAGGTTTACATCATTATGAGAAAATCGATCGTCGACGAGGCGCTATACCATCTCGGAGTGGAAAAACTGAGCCTCTCTCAGGTTCAGAAGCTGGACTGGGAGGTTCTCGAGTTAAAGATCAAGAGCTGGTTACACGCCGTCAAAGTCGCCGTCGGAACTCTCTTCCACGGCGAGAGGATCCTCTGCGATCACGTTTTCGCCGCAGATTCCGGAAAGAGAATCGCGGAATCTTGTTTCGCGGAAATCACCAAAGACGGCGCCGTATCACTGTTCGGATTCCCGGAAATGGTGGCGAAGTGCAAGAAAACGCCGGAAAAAATGTTCAGGACTTTGGATTTGTACGAATCGATATCCGACCACTGGCCTCAGATCGAATTCATATTCTCCTTCGAATCCACGTCTAACATTCGCTCACAGGCCGTTGCGTCGATGGTGAAACTTGGCGAAGCCATTAGAACTATGCTAACGGACTTCGAAACCGCGATTCAGAAGGAGTCCTCGAAGAAACCAGTCCCTGGCGGAGGGGTCCACCCTCTCACGCGCTACGTGATGAACTACCTCACGTTCCTCGCCGATTACAGCGGCGTGTTGGTCGATATAAGCGCTGATTTGCCGCAATCACCGTTGCCGGAGTCTTACTACCGCAGCCCGATGCGCGACGAAAACCCGCCAGCTTCGGAGTTATCGGAGCGAATCGCGTGGCTTATACTCGTTGTGCTGTGCAAGCTCGACGGCAAAGCGGAACTCTACAAGGACGTGGCGCTTTCTTACCTGTTCCTCGCGAATAACATGCAATACGTCGTCGTAAAGGTGCGCAAATCCAACCTAGGGTTTCTTCTCGGGGAGGAGTGGTTGGAGAAGCATGAATTGAAGGTTAAAGAGTACGCGTCGAAGTACGAGCGCGTCGGGTGGGACGCGGTGTTATCAGCGATGCCGGTAAATCCCGCGGCGGAGTTGACGGCGGAGCAGGCCAGGGCCTGCTTCGCGAGGTTCGACGCTGCGTTTCATGAAGCGTGTAGAAAACAGTCCTCGTGGGTCATATCCGACCCGAAATTTCGTGATGAAATCAAGGGCTCGATAGCTTCGAAGTTGGTGCAAAAGTACAGCGAATTCTACGAGAAGAATCGGGTCGGGTCGAGATCCGGTAGAGACTTTTTACCCGAAGATATAGAAAAATACATGTCTAACATTTTGTGCAATGGAGATTCAGGCAGTGTCTCGTCACATTCATCGTCAACGACGTCGTCGTCTTCCCATCGCTCTAATCGACGGTGA 1857 0.5245 MPRKGMRSIFFRPSPTPSSLPPPSPRRTFSDSLMDENLQTAETLITKWDDSNANYQSKIPTPLFSGTRQEAKQYLNAVKGLQSAMQYLVAQDSSSSTLVRAQFLMQLAMKTLQKEFYQILSSNREHLDPETVSTRSSVDQRSVSDYVSDYDDEVSITEDEFRVSETERVSMLAMEDLKAIAECMISSGYGKECVQVYIIMRKSIVDEALYHLGVEKLSLSQVQKLDWEVLELKIKSWLHAVKVAVGTLFHGERILCDHVFAADSGKRIAESCFAEITKDGAVSLFGFPEMVAKCKKTPEKMFRTLDLYESISDHWPQIEFIFSFESTSNIRSQAVASMVKLGEAIRTMLTDFETAIQKESSKKPVPGGGVHPLTRYVMNYLTFLADYSGVLVDISADLPQSPLPESYYRSPMRDENPPASELSERIAWLILVVLCKLDGKAELYKDVALSYLFLANNMQYVVVKVRKSNLGFLLGEEWLEKHELKVKEYASKYERVGWDAVLSAMPVNPAAELTAEQARACFARFDAAFHEACRKQSSWVISDPKFRDEIKGSIASKLVQKYSEFYEKNRVGSRSGRDFLPEDIEKYMSNILCNGDSGSVSSHSSSTTSSSSHRSNRR 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0444 618 SUPERFAMILY Cullin repeat-like 42 590 IPR016159 -
Aed5g0444 618 PANTHER EXOCYST COMPLEX PROTEIN EXO70 6 598 IPR004140 GO:0000145|GO:0006887
Aed5g0444 618 Pfam Exo70 exocyst complex subunit 235 588 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aed5g0444 618 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 6 598 - -
Aed5g0444 618 MobiDBLite consensus disorder prediction 1 28 - -
Aed5g0444 618 Gene3D Exocyst complex component Exo70 52 596 - -
Aed5g0444 618 MobiDBLite consensus disorder prediction 596 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0444 Aed-Chr5 3138217 3140073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0444 10 591 EXO70 exocyst subunit family AT5G59730 50.083 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0444 K07195 - gmx:100810579 1020.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0444 5 3138217 3140073 Aed5g0444 5 3138217 3140073 ECH