Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0438 ATGAATTCTGAGTCCCTCTTGTTACTTCTCATTGTCTTCATTTCTGCTTCCATTCTGAAACTCTTGTTTGAGAGAAAAAAGAAACCAAAGTCCCATTCGAAGCACCCTCCAAGCCCACCAGCAATTCCCATAATCGGTCACCTCCATCTCCTTAAACCTCTCATCCATCACTCATTCCGAGACCTCTCTCTCCGATATGGGCCTCTTCTGTGCCTTCGAATCGGTTCAGTTAAGTTCATAGTTGCAAGCACCCCAGAACTCGCCAAAGAGTTTCTAAAGACCAACGAGCTCACATACTCTTCCCGCAAAATGAACATGGCCATCAACATGGTTACCTACCACAACGCCACGTTCGCGTTTGCACCTTACGACACTTACTGGAAGTTCATGAAAAAGCTAAGCACCACCGAGCTCTTGGGAAACAAAACCCTAGGACAGTTCCTACCTATTCGGACAAGGGAAATTCAGGAGTTCATTCTAACATTATTCGATAAGTCGAAGGCCAATGAGAGCGTTAACCTCACCGAAGCACTCTTGAAGCTTTCCAACAACATAATATCGCAGATGATGTTGAGCATTAAGAGTTCCGGAACAGACGGTCAGGCAGAGCAGGCACGCGCTTTGGTGCGTGAGGTCACGCAGATTTTCGGGGAGTTTAATGTGTCGGATTTCTTAGGTTTCTGCAAAAACTTGGACTTGCAAGGTTTCCAGAAGAGGGCATTGGACATACATACGAGGTACGATGCTCTGCTAGAGAAGATTATCTCTGATCGTGAGGAGTTGAGAAGGAAATCAAACGAATTAGAGAGTTGTTGTGAAGATGAGAAAGTGAAAGATTTTCTTGACATTTTGCTGGATGTTGCTGAGCAGAAAGAATGCGAGACCGAGTTAACTCGGAACCATGTCAAATCATTGATCTTGGATTACTTTACAGCAGCTACAGATACAACTGCCATATCAGTGGAATGGACAATAGCAGAACTATTCAACAATCCAAAGGTGTTGAAGAAAGCACAAGAGGAGGTAGACAAAGTCAGTGAAAACAAGAGACTAGTGTGTGAAGCAGACATTCCAAACCTTCCTTATATCACTGCCATCATAAAAGAAACAATGAGACTTCATCCTCCAATACCAATGATTATGAGAAAAGGAATCGAAGACTGCATGGTTAATGGAAACATGATTCCAAAAGGTGCAATAGTTTGTGTAAACATTTGGGCTATGGGGAGGGATGCAGATATTTGGAAGAAGCCTTTAGAGTTTAGGCCAGAGAGGTTTCTAGAAGGTGAAGGACGTTCCATAGATACAAAAGGGCATCATTTTGAGTTGTTGCCATTTGGTAGTGGAAGAAGAGGATGTCCTGGAATGCCTTTGGCCATGCGAGAATTGCCAACTATCATTGGAGCTCTCATTCAGTGCTTTGATTGGAAGATGTTAGGTTCTCAAGGTGAATTCTTTGACCATGGAAAATGTTTAATCAATATGGATGAACGGCCAGGATTGACTGCTCCAAGGGCTAATGATCTTGTTGGCATTCCTGTTGCAAGATTGAACCCCACTCCTTTTCGTCAAGTGTAG 1578 0.4341 MNSESLLLLLIVFISASILKLLFERKKKPKSHSKHPPSPPAIPIIGHLHLLKPLIHHSFRDLSLRYGPLLCLRIGSVKFIVASTPELAKEFLKTNELTYSSRKMNMAINMVTYHNATFAFAPYDTYWKFMKKLSTTELLGNKTLGQFLPIRTREIQEFILTLFDKSKANESVNLTEALLKLSNNIISQMMLSIKSSGTDGQAEQARALVREVTQIFGEFNVSDFLGFCKNLDLQGFQKRALDIHTRYDALLEKIISDREELRRKSNELESCCEDEKVKDFLDILLDVAEQKECETELTRNHVKSLILDYFTAATDTTAISVEWTIAELFNNPKVLKKAQEEVDKVSENKRLVCEADIPNLPYITAIIKETMRLHPPIPMIMRKGIEDCMVNGNMIPKGAIVCVNIWAMGRDADIWKKPLEFRPERFLEGEGRSIDTKGHHFELLPFGSGRRGCPGMPLAMRELPTIIGALIQCFDWKMLGSQGEFFDHGKCLINMDERPGLTAPRANDLVGIPVARLNPTPFRQV 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0438 525 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0438 525 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0438 525 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0438 525 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0438 525 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0438 525 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0438 525 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0438 525 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0438 525 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0438 525 Coils Coil 335 355 - -
Aed5g0438 525 PANTHER CYTOCHROME P450 FAMILY FLAVONE SYNTHASE 6 521 - -
Aed5g0438 525 SUPERFAMILY Cytochrome P450 36 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0438 525 Coils Coil 251 278 - -
Aed5g0438 525 Pfam Cytochrome P450 36 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0438 525 Gene3D Cytochrome P450 21 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0438 525 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 6 521 - -
Aed5g0438 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Aed5g0438 525 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0438 525 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0438 525 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0438 525 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0438 Aed-Chr5 3077955 3081158 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0438 36 516 Cytochrome P450 AT5G06900 42.029 4.69e-142 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0438 K23179 - gmx:100783503 912.524