Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0423 ATGTCTTTGGAAAACAAGGGATTTTGGATGGTAAAGGGTTCTGGACACATTAATGACAGGGAGACAGTATTTGATAATCCTTCCAAAATTGAACCAAAACGTCCTCATCAATGGTTTGTTGATGCTGCTGAAGTAGATTTTTTTCCAAACAAGAAACAAGCTGTAGAAGATGCAGATGAAAAATCTAGTCCTGGATTTTCAAATGTAAATATTCCTCCCTGGGAGAACAATCCCAATTTTCATTCAGTCCCAAACCAATTTATTGGCCGATTATTTGGGTCTGAAACCAGGCCTGTCAATTTCACTGGAAAGAATGCTTCTTATGTTTTGGCTGATGATTCTAATGTGAGATCAAAGATGATCACCAATCAATATGGAGATGATGCATCTTTTGGTCTGTCTATTTCTCATTCTATTGAAGATTCTGAAGCATGTGTAAATTTTGGTGGAATAAAAAAAGTCAAAGTAAATCAAGCTAAGGAAGATGATATACAGGCTCTGGAGGGACATAATTTTAGTAGGCATAGTAATGGTGATCTACATCAGGCCTATAACAGGGAAGTTGAGTCAAGGTCTGCATCAATAGGGCAAACCTTTGACACGGATAGTGATGCCACTTTAATGGGACTCACCTACAGCAGAGGGGATGCACATGTCAGATCATTTAGTGCTCCCTTTGTCAAAGGAGATGACTCAATCGTATCAATTAGTGAATCCTATAATAAAGAGGACACAAATATAATTTCTTTTGGTGGGTTCCCAGATGAAAGGGATATTATCTCTGTGGGTAGGCCTGCTGCAGAGTATGATGAATTATACAATCAATCTTCAGTTCTTGTGTCAACATCAGCCCATGAGAAAGAGTTGGATGTGTCAAGTTCTGATGCTGTTGCAAGTACACTTCAGGTAGCAAAAGTCAAGTCTGAAACTGTATCCAAGAATAAACAAGAGTTCAGAACAGCAAGGAAAGAAGCTCCAAACAGCTTCCCGTCTAATGTCAGAAGCTTGATATCTACTGGTATGCTTGATGGAGTTCCTGTAAAGTATATCTCAGTGTCACGGGAGGAACTTCGTGGAATTATAAAAGGCTCTGGCTATCTTTGTGGGTGTCGGTCATGTAACTATACAAAGGTTCTGAATGCTTACGAGTTTGAGAGGCATGCTGGCTGCAAAACAAAACATCCTAACAATCATATTTATTTTGAGAATGGGAAGACCATTTATCAAATAGTACAGGAATTGAGGAGTACCCCCGAAAGTTTGTTGTTTGATACAATTCTAACAGTTTTTGGTTCACCAATTAATCAGAAAGCATTTCGCAACTGGAAAGAATCATTTCAAGCAGCAACACGGGAGCTTCAACGCATTTATGGAAAGGAAGGACTTAACCTATAA 1395 0.3885 MSLENKGFWMVKGSGHINDRETVFDNPSKIEPKRPHQWFVDAAEVDFFPNKKQAVEDADEKSSPGFSNVNIPPWENNPNFHSVPNQFIGRLFGSETRPVNFTGKNASYVLADDSNVRSKMITNQYGDDASFGLSISHSIEDSEACVNFGGIKKVKVNQAKEDDIQALEGHNFSRHSNGDLHQAYNREVESRSASIGQTFDTDSDATLMGLTYSRGDAHVRSFSAPFVKGDDSIVSISESYNKEDTNIISFGGFPDERDIISVGRPAAEYDELYNQSSVLVSTSAHEKELDVSSSDAVASTLQVAKVKSETVSKNKQEFRTARKEAPNSFPSNVRSLISTGMLDGVPVKYISVSREELRGIIKGSGYLCGCRSCNYTKVLNAYEFERHAGCKTKHPNNHIYFENGKTIYQIVQELRSTPESLLFDTILTVFGSPINQKAFRNWKESFQAATRELQRIYGKEGLNL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0423 464 Pfam Tify domain binding domain 359 414 IPR032308 -
Aed5g0423 464 PANTHER DNA-BINDING PROTEIN 1 464 - -
Aed5g0423 464 PANTHER AUTOIMMUNE REGULATOR 1 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0423 Aed-Chr5 2991475 2996642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0423 311 447 PHD Transcription Factor Family AT3G53680 51.449 2.81e-40 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0423 - - gmx:100819317 881.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0423 5 2991475 2996642 Aed5g0423 5 2991475 2996642 ECH