Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0398 ATGGGAAACGGCATAGGCAAGTTAACGGTGTGCTTCACCGGGAACGGTGGAGGGGGTCGTCGGAAACATGATATATCCATTTTAATAACGGAGCCGTTAGATGAGGGTTTGGGCCACTCTTTCTGCTATGTTCGACCCGACCCGACCCGGGTATCTTCATCTAAGGTTCACTCGGAGGAAACGACGACGTTCAGAACAATCTCGGGCGCCTCAGTTAGCGCGAACACGTCGACGCCGTTATCGACGGCGTTTGTGGATTTGTACTCGTACGGTTGCATCGACAGAGCCGCGGCGTTTGAAAGTTCAACGTCGTTCGCGGCGTTACCTCTGCAACCGATTCCGAGGAACTTTGTGAACTCGGGCCCGTTCTCAGGGAACTTGGGCGGCGGCGGGTTTCTGGGCTCGGGCCCGCTGGAGAGAGGGTTCATGTCGGGCCCAATCGAGCGCGGGTTCATGTCCGGGCCCATCGATCGCGGGCTTTTCTCGGGTCCGATGGAGAGGGACGGGAACGGAATCGGAAACGGATCGGATCAGTTTCAGAGAAGCTTCTCGCACGGAGGTTTGGGATTAGGGTTAGGTATGAGAGTGAGAACGAGGAAGGGTAAGTGGATACGCGTTTTGCAGAGGGCGATTTCGAAGACTCTGTCTCGGGGTCACAATTCGATTGTGGCTCCGATCAAGGGCGTGATGGTGAAGGAGCCGGAGTGGATGCTGGCGGCGGAGAAGCATAACGAGAATCTGAGCGTGAATTTGAGCAGTGAGGGGAGTTTGGAGGACGATGATTCGATGGAGAGTCAGAATCTTCAATGGGCGCAGGGGAAAGCAGGGGAGGATCGTGTTCATGTTGTGGTTTCCGAGGAACACGGTTGGGTTTTCGTGGGGATCTATGATGGTTTCAGTGGACCTGATGCACCTGATTACCTTCTTTCGAATCTCTACACCGCGGTGCATAAGGAGCTCAAAGGGTTGTTGTGGGATGATGGGTCTGCACCGGAAAATTCTATGATGCTGAGAGAGGACTTGTTGCGAGATGTTACAACCGATGTTGCTGATGTTAGAGATACAGATGAAGATGCTTGTTTTCACTGTGTTGAGCAAGAGCAAGATAGTAAGAGTAGTAATAAGAGGGGTAGTAGGAATTCGAGGAACAAGTTCAAGGGTGCTGCAAAGAAATGGGAGGAGAATCAACGGAGGTGGAAGTGTGAATGGGATAAGGAAAGATTAGAGCTTGATCGGAGATTGAAGGAGCAGCTGAGTTTAAGTCGATCTGGGTCGGGTGGAGAAGCAACTTCTACTAATCCTTTGGATGTTTTGGAGGCTCTTTCTCGGGCTTTAAAGAAGACTGAGGAGTCTTATCTTGATGTCGCGGATAAGATAGTGATGGAGAATCCTGAACTCGCCTTGATGGGTTCGTGTGTTCTTGTGATGTTGATGAAGGGGGAGGATGTCTATGTGATGAATGTGGGGGATAGTCGTGCCGTGTTGGCTCAGAAGGCTGAGCCTGATTACTGGCTTGGGAAAATCAGGCAGGACTTGGAGAGGATCAATGAGGAGACAATGAATGATCTTGAATCTTGGGATGTTGATACGTCCAACTTGGTTCCGAGTTTGAGTGCGATTCAGCTTACCAAGGATCATAGTACTAGTGTTGAGGAAGAAATCCAGAGAATTAAAAAAGAGCACCCGGATGATCCTTGTGCTGTTGTAAATGACCGTGTTAAGGGTTCTCTCAAGGTTACTCGGGCATTTGGTGCCGGATTTCTCAAACAGTACTTGTCAAACGAAGAGGCAGTGGCTGAAGTTGAGCTTTTCATCACATTGCAACCAGAGGGAGACCCGGCTCAGCATTTGGTTGAAGAAGTGTTGTTTCGTGCTGCAAAGAAAGCTGGTTTGGACTTTCATGAGTTGCTCGAAATTCCACAGGGTGATAGGCGCCGTTACCATGATGATGTTTCGATCATTGTTATTTCTTTGGAGGGAAGGATATGGAGATCATGTGTATAA 2004 0.4995 MGNGIGKLTVCFTGNGGGGRRKHDISILITEPLDEGLGHSFCYVRPDPTRVSSSKVHSEETTTFRTISGASVSANTSTPLSTAFVDLYSYGCIDRAAAFESSTSFAALPLQPIPRNFVNSGPFSGNLGGGGFLGSGPLERGFMSGPIERGFMSGPIDRGLFSGPMERDGNGIGNGSDQFQRSFSHGGLGLGLGMRVRTRKGKWIRVLQRAISKTLSRGHNSIVAPIKGVMVKEPEWMLAAEKHNENLSVNLSSEGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFSGPDAPDYLLSNLYTAVHKELKGLLWDDGSAPENSMMLREDLLRDVTTDVADVRDTDEDACFHCVEQEQDSKSSNKRGSRNSRNKFKGAAKKWEENQRRWKCEWDKERLELDRRLKEQLSLSRSGSGGEATSTNPLDVLEALSRALKKTEESYLDVADKIVMENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKAEPDYWLGKIRQDLERINEETMNDLESWDVDTSNLVPSLSAIQLTKDHSTSVEEEIQRIKKEHPDDPCAVVNDRVKGSLKVTRAFGAGFLKQYLSNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0398 667 CDD PP2Cc 432 658 IPR001932 -
Aed5g0398 667 ProSiteProfiles PPM-type phosphatase domain profile. 260 658 IPR001932 -
Aed5g0398 667 MobiDBLite consensus disorder prediction 365 389 - -
Aed5g0398 667 SUPERFAMILY PP2C-like 274 659 IPR036457 -
Aed5g0398 667 PANTHER PROTEIN PHOSPHATASE 2C 588 667 IPR015655 GO:0004722|GO:0006470
Aed5g0398 667 PANTHER PROTEIN PHOSPHATASE 2C 17 590 IPR015655 GO:0004722|GO:0006470
Aed5g0398 667 Gene3D - 233 663 IPR036457 -
Aed5g0398 667 Pfam Protein phosphatase 2C 428 598 IPR001932 -
Aed5g0398 667 PANTHER - 17 590 - -
Aed5g0398 667 SMART PP2C_4 261 656 IPR001932 -
Aed5g0398 667 PANTHER - 588 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0398 Aed-Chr5 2834591 2838383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0398 1 667 PP2C-type Phosphatase Gene Family AT1G07630 61.951 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0398 - - gmx:100810214 1148.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0398 5 2834591 2838383 Aed5g0398 5 2834591 2838383 ECH