Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0395 ATGAAGTGCTTCTATTTCTCAAACGGAGGAGATGACGACGATTCCGTTGCAGCCGCGCCGAGTTCGCGCGGTTCCACCTCGCGTGTGTCGTGGGCGCGTTCGCTGAGCCTGATGGACACGCGCAGCCGCACAAACTACGACTCGGAGTCAACGGAGTTCTCCGACACGGTGGACTTCCACCACTTCCTGGCGCAGCGGCGCGCGAACGACCTCCGAATCTTCTCGTTCTCCGCCCTGAAATCCGCCACGCGCGGGTTCAGCCGCGCCCTGCTCGTCGGCGAGGGAGGGTTCGGGTCGGTGTACAGAGGCCTGATCGATCAAAACGACGACGTGGCGGTGAAGCAGCTGAACCGTAACGGGCAGCAGGGGCACAAGGAGTGGATCAACGAGGTGAATTTGTTGGGGGTTGTGAAGCACCCTAATTTGGTGAAGCTTGTTGGGTACTGTGCCGAGGACGATGAGAGAGGGATTCAGAGGCTTTTGGTTTACGAGTTTATGCCGAATAAGAGCTTGGAGGATCATCTATTGGCGCGAGTTCCTACGACGATAATCCCTTGGTGGACCAGGTTGAGGATTGCGCAGGATGCGGCCAAGGGTTTGGCGTATCTTCATGAGGAAATGGATTTTCAGGTATCTGTAGAGGACACTGTACCTGAACCAGCTAAACAAGGGAACAATTACCTGAAGAAGGTTTTTGAATTGAAAGACATGGTCAGCTTTAGAAATAAGTCTATTGGAAGGTTGGATTGGAAAAGTTGGGCACCTGGGCTAGTAAGAACTTGGTGA 786 0.542 MKCFYFSNGGDDDDSVAAAPSSRGSTSRVSWARSLSLMDTRSRTNYDSESTEFSDTVDFHHFLAQRRANDLRIFSFSALKSATRGFSRALLVGEGGFGSVYRGLIDQNDDVAVKQLNRNGQQGHKEWINEVNLLGVVKHPNLVKLVGYCAEDDERGIQRLLVYEFMPNKSLEDHLLARVPTTIIPWWTRLRIAQDAAKGLAYLHEEMDFQVSVEDTVPEPAKQGNNYLKKVFELKDMVSFRNKSIGRLDWKSWAPGLVRTW 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0395 261 ProSitePatterns Protein kinases ATP-binding region signature. 92 114 IPR017441 GO:0005524
Aed5g0395 261 Pfam Protein tyrosine and serine/threonine kinase 92 206 IPR001245 GO:0004672|GO:0006468
Aed5g0395 261 SUPERFAMILY Protein kinase-like (PK-like) 69 206 IPR011009 -
Aed5g0395 261 Gene3D Phosphorylase Kinase; domain 1 60 165 - -
Aed5g0395 261 PANTHER SERINE/THREONINE-PROTEIN KINASE PCRK1 24 215 - -
Aed5g0395 261 PANTHER OS01G0588500 PROTEIN-RELATED 24 215 - -
Aed5g0395 261 Gene3D Transferase(Phosphotransferase) domain 1 166 219 - -
Aed5g0395 261 ProSiteProfiles Protein kinase domain profile. 86 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0395 Aed-Chr5 2816696 2819137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0395 72 215 Glycoside Hydrolase AT3G07070 51.370 6.23e-39 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aed5g0395 PK_Tyr_Ser-Thr 5.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0395 - - gmx:100811825 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0395 5 2816696 2819137 Aed5g0395 5 2816696 2819137 ECH