Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0389 ATGGATCCTCATTTGAAGTCCAATTTCATGAATGGCGGCGTTAAGCCCAACCAAGTGCCCAACACAGTTGGTGTAGAGGATCAGTTCCTTGACCCTGTAAATGGGATGATGAAACCCTTTGAATTTGGATTCATGGATGATATTGATAACCCGTTTATTCTTCCACCTGATGATCCAAACGCTGCTCAAAATCCTTTTTCCTTTTCCACCGATGAAGACTCTCCATTGGATGAGATTGATTTTTCTGGCACTGTTCTACGTTACATAAACCAAATGCTTATGGAAGAGGACTTGGAAGCCAAGCCGTGTATGTTCCATGATTCCTTGGCTCTCCAAGCTGCTGAGAAATCCTTCTCTGAGGTCATTGGTGAGACATACACATACCCTTCTTCCATCCAAAACTATCACAATGTGAATGTGGACAGCCCTGATGATAGTAGCTTCAGTGGTACAACAACTAGCACTAGTAACTCGTTTGAGTCGCAATGGAGTAACTTTGATCTTGCTGACTACAAGCCTTCCATACTGCAAACCACTTTTCCTTCTGACTTTGTTTTCCAGGCGAGTTCAATCCAATCTTCTATTATGAACACCACGACCAACTTTGCGGCTAGATTTATGGATCCAGGTTCAACAAACTTGTTTAGCAAGAGTGAGTCTGTACTTCTATTTGAGAGGGGTGTGGAGGAAGCCAATAAGTTCCTTCCTAAAGGGAATCCGTTGGTTATTGATTTGGAGAACCCCTCTTTTAGAATGGTTCCTCCTCAGCAGGTGGAAATTAAGGCAGAGAGAGATGAAATTTCTGCTGAGTCAAAAGGAAGGAAGAATCACGAGCGGGAAGATGAAGAAGCGGATTTACAAGATGGGAGAAGCAACAAGCAGTCAGCTGTGTACATTGATGACAGTGAGATATCTGAATTGCTTGATAAGGTACTGCTGGGCACGAGGTGCAGAAATAATGAGCCAGCTCCTAATGGACAATCCTTGGGTAAATTAGAAGAAACAAACAAGTCTGGTGGTGGGAAGAGCCGTGTTAAGAAACAAGGCAATAAGAAGGGAGTTGTGGATCTGAGGACATTATTGATTCTATGTGCACAAGCTGTTTCTTCTGATGATAGCTTATCGGCTAATGAGTTATTGAAGCAGATAAAGCAACATGCTTCTCCACTGGGGGATGGGACTCAGAGGATGGCCCATTGCTTTGCAAATGCCCTTGAAGCACGCTTGGCTGGCACCGGCACTCAGATTTATACTGCTCTATCTCATAAAAGAACCTCTGCAGCGGACATGGTGAAAGCTTACCAAATGTATATTTCAGCCTGTCCATTCAAGAAGCTTTCGATCATTTTTGCAAACCATACAATTTTGCAACTAGCCAAGGAAGTTGAAACTCTTCATATTATAGATTTTGGCATCCGTTATGGCTTCCAGTGGCCAGCTGTTATTTATCGTCTATCAAAACAACCTGGTGGGCCTCCCAAGCTGCGCATTACAGGGATAGAGCTCCCACAACCTGGTTTCAGGCCAACTGAGAGAGTCCAGGAGACAGGGATTCGGCTTGCAAGGTACTGTGATCGCTTTAATGTTCCATTTGAGTTCAATGCCATTGCACAGAAATGGGAAACCATCAAAATTGAGGACTTGAAGATAAAGGAAAATGAACTTCTTGTAGTGAATGCTATGTTTCGATTTCAAAATCTGCTTGATGAGACAGTTGTGGTGAATAGTCCCCGGGATGCTGTTTTAAAGTTAATAAGGAAGGCAAATCCTGCGATCTTTATACATGGTACTGTCAATGGGAGCTACAATGCTCCATTCTTCGTGACACGGTTCAGGGAGGCCCTTTTCCATTATTCTACTCTGTTTGATGTGCTTGATACCAATGTTGCTCATGAAGATCCAATGAGGTTGATGTTTGAGAGAGAGTTCTTTGGGAGGCAGGTAATGAATATAATAGCTTGTGAGGGTTGTGAGAGGGTTGAGAGGCCTGAGACATACAAGCAATGGCAAGTTAGGAACATGAGGGCTGTATTTAAGCAACTCCCCTTGGATAAACATCTCATTAACAAATTAAGATGCAAGTTGAAAGATATGTACCACAGTGATTTCATGCTTCTTGAAGATGGCAACTATATGCTGCAAGGTTGGAAGGGCCGAGTAGTTTATGCTTCCTCCTGTTGGGTGCCTGCATAG 2193 0.4323 MDPHLKSNFMNGGVKPNQVPNTVGVEDQFLDPVNGMMKPFEFGFMDDIDNPFILPPDDPNAAQNPFSFSTDEDSPLDEIDFSGTVLRYINQMLMEEDLEAKPCMFHDSLALQAAEKSFSEVIGETYTYPSSIQNYHNVNVDSPDDSSFSGTTTSTSNSFESQWSNFDLADYKPSILQTTFPSDFVFQASSIQSSIMNTTTNFAARFMDPGSTNLFSKSESVLLFERGVEEANKFLPKGNPLVIDLENPSFRMVPPQQVEIKAERDEISAESKGRKNHEREDEEADLQDGRSNKQSAVYIDDSEISELLDKVLLGTRCRNNEPAPNGQSLGKLEETNKSGGGKSRVKKQGNKKGVVDLRTLLILCAQAVSSDDSLSANELLKQIKQHASPLGDGTQRMAHCFANALEARLAGTGTQIYTALSHKRTSAADMVKAYQMYISACPFKKLSIIFANHTILQLAKEVETLHIIDFGIRYGFQWPAVIYRLSKQPGGPPKLRITGIELPQPGFRPTERVQETGIRLARYCDRFNVPFEFNAIAQKWETIKIEDLKIKENELLVVNAMFRFQNLLDETVVVNSPRDAVLKLIRKANPAIFIHGTVNGSYNAPFFVTRFREALFHYSTLFDVLDTNVAHEDPMRLMFEREFFGRQVMNIIACEGCERVERPETYKQWQVRNMRAVFKQLPLDKHLINKLRCKLKDMYHSDFMLLEDGNYMLQGWKGRVVYASSCWVPA 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0389 730 MobiDBLite consensus disorder prediction 320 334 - -
Aed5g0389 730 PANTHER SCARECROW-LIKE PROTEIN 14 52 729 - -
Aed5g0389 730 ProSiteProfiles GRAS family profile. 348 728 IPR005202 -
Aed5g0389 730 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 52 729 IPR005202 -
Aed5g0389 730 MobiDBLite consensus disorder prediction 1 22 - -
Aed5g0389 730 MobiDBLite consensus disorder prediction 259 295 - -
Aed5g0389 730 MobiDBLite consensus disorder prediction 318 349 - -
Aed5g0389 730 MobiDBLite consensus disorder prediction 259 289 - -
Aed5g0389 730 Pfam GRAS domain family 357 727 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0389 Aed-Chr5 2777967 2780159 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0389 85 730 GRAS Transcription Factor Family AT1G07530 54.373 0.0 725
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed5g0389 GRAS 4.7e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0389 - - gmx:100815586 1275.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0389 5 2777967 2780159 Aed5g0389 5 2777967 2780159 ECH
Aed1g1232 1 11800491 11803237 Aed5g0389 5 2777967 2780159 ECH
Aed1g1231 1 11795280 11797022 Aed5g0389 5 2777967 2780159 PCT