Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0387 ATGACCAAAGTCCTACAAACACTTGATGATTACTTGAGTCTTGAGATATTTCAGCATGCTGCAATGGTGAAGCTTATTTTGCTGCTACCCACTTACTTAACCTTCAGGTGCAGTGATGAAGATTATTGTACTAAGCTTTGCACCAGGAAGATAAATCCGGATATTTTTACTCAGATCATCACCACTCGATCATATGATGCCACTTTCTTTGCCACAATGTTTAGGGAGGCACTCTTCCATTATTCTGCTCTTTATGACTGA 261 0.3946 MTKVLQTLDDYLSLEIFQHAAMVKLILLLPTYLTFRCSDEDYCTKLCTRKINPDIFTQIITTRSYDATFFATMFREALFHYSALYD 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0387 86 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 48 86 IPR005202 -
Aed5g0387 86 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 48 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0387 Aed-Chr5 2760447 2773288 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0387 38 86 GRAS Transcription Factor Family AT1G07530 55.102 1.28e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0387 - - gmx:100794790 68.5514