Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0365 ATGGGGCACAGTTCGAATAAGAAGAAGAAGCGCGGCGCTGGTGGCGGGAGCGGTCGACGGAACAAGGGAAGAACGCAGTCCAAAGATCATGCTTCTCAGTTCGGCGCCGACGATTATGAACACCTCTCCGAAGAGATTACCGCATTATGCGCAATTTTCGAAGAAGACTTCAAGGTTCTTCCAGGATCGCCTCCTCGAGTAGTTATTAAGCTCAAGCCTTACTCAAAAGGCATGGGTTACGAGGACTTAGATGTTTCTGCTGTTCTTGCTGTCAGGTGCTTGCCTGGGTATCCCTTCAAGTGCCCCAAGTTGCAGATTACTCCGGAGAAAGGGTTATCAGAAGCTGATGCTAATAAGCTTCTGTCTCTCCTCCAAGATCAGGCTACTTTAAATGCCAGGGAGGGACGAGTAATGATCTATAATTTGGTAGAGGCTGCTCAAGAATTTCTGTCTGGTATTGAGCCAATTGCCAAAACAAATGATTCTAAGCTGTTACACTCAACGGTTGAGAGCAATGAAGAATTGTTTCCCAAGGATATGTCATCTATAAATAAGAAGGGTTCTTTTGTTTACGGTTTTATAGACCTTTTCAGTGGCTGTGGAGAAACATGGAATTGGGGTTTTGGAATGGATGAAACTGCAGGAAAAAGTTCTCTTCCTCCATCTAAGTTAGATGCCTCAAAACCACGGGAGAAGAAATCTGATAGTAAGGAAACACCGTTAATAATGCAAGAACTTCCTGCCAAATTAGATACTGTTGGAGAAGTTAGTGAAGAAAGCAACAATAGTTTATCTTTGTCTCCTTCAAGTAGATCTTTGGTGGAGGATTTTACAGGGAACGGCAATGAAGGTGAGAAAGAGTATTTTATCATTGATGAGTATACAACAGAAGATAATGAAGGTATTAATGAAAGTGAGTCTTCAGAGTCTCTGTCTTCTGAATCCTTGCCTCATCACCAACTATCTCCAACTGTTGAAAAGGATCTAATTATGGTTCACATGCTTCGCCTTGTTTGTGCTTCTAAGGGAACATTGGCTGACTGTTTGCCACAAGTGGTAACAGATCTGTACAATTTAGGGGTCATTTCTGACTCAGCACGTGATATGGCATCTGAACCACCTTCCATGTTCAACAAAACCTTTGATCGTGTTTTCCAGAAACACCTGGCTTCATCCAGATTATCACAATTTTGGAAACCTGATCTTGGAGGCTCAAACACAGTTCCCCATAGTTCTCGATATTTGAATGATTTTGAGGAGCTACAACCTCTTGGTCATGGTGGTTTTGGTCATGTCGTATTGTGCAAAAATAAACTTGATGGAAGACAGTATGCAGTAAAGAAAATTCGCCTCAAGGACAAAACCATGCCTGACCGGATATTAAGGGAAGTGGCTACACTTTCTCGTTTACAGCATCAGCATGTTGTTCGGTATTATCAGGCATGGTTTGAAACTGGAGTTTCTGATTCTTATGGTGATTCTGCTTGGGGTTCAAAGACTACAGTTAGCTCTACTTTCAGCTACAAAGCTGCAACCTCCAACGATGCCTTTGGGCCTGAGAATCAGATTGAATCGACTTACCTTTATATACAAATGGAGTACTGTCCCAGGACTCTTCGCCAGGTGTTTGAATCATATAATCATTTTGACAAAAAATTGGCATGGCATTTGTTTCGACAAATAGTGGAAGGCTTGGCACACATACATGGTCAAGGAATAATTCATCGGGATTTGACACCAAGTAACATATTCTTTGATGCTCGCAATGATATTAAAATTGGTGATTTTGGTCTTGCCAAGTTCTTGAAGTTGGAGCAGCTGGATCAAGATCTGGGCCATCCTGCTGATGCAACTGGAGTTTCCATTGATGGCACTGGACAAGTGGGAACATATTTCTATACAGCTCCTGAAATTGAGCAAGGATGGCCCAAGATTGATGAAAAGGCTGATATGTACAGCTTAGGAGTGGTTTTCTTTGAGCTTTGGCACCCATTTGGGACAGCAATGGAGAGACATGTTGTTTTATCTGATCTGAAACAGAAGAAGGAAGTTCCACCTACTTGGGTTGCTGAATTTCCAGAACAGGAATCCTTGCTGCAGCAGTTAATGTCTCCAGCTCCTTCAGATCGCCCTTCTGCCACAGAACTTTTGCAAAATGCATTTCCTCAACGAAAGGAGTCTGAATTATTGGATGATATCCTACGAACAATGCAGAAATCAGAGGATACAAGCATATATGATAAGGTTTTAAATGCTATCTTTGACGAAGAGATGTTAAGCACAAATCACATTCATCAGGTTGGTAGATTGGGATCAGTTGGAGATAACAGTTCATCCATTCAGTACACAGAATTCAAGACTGAGGTTCGAGATTATGTTGTAGATGTGAACAGGGAAATTTTCAGACAGCATTGTGCTAAGCACCTAGAAATATCAACAATGCGATTATTGGATGATTGTCCACAGTTTAATAGTAGAAATGCTGTTAAACTTCTGACCCATGGAGGAGACATGCTTGAACTTTGCCATGAGTTGCGTTTGCCTTTTGTGAACTGGATTATATCCAACCAGAAATCTTCATTCAAACAATATGAGATATCACGTGTCTTCAGAAGAGCAGTTGGACACTCATCACCAAACCACTACCTTCAGGGAGATTTTGACATTATTGGTGGTACCTCGGCATTGACAGAAGCAGAGGTCATAAAGGTCACATGGGACATAGTCACCTGTTTTTTCCATGAAGACTCATGTGACATTCATCTCAACCATGGTGCCCTTCTGGATGCAATTTGGTCATGGATTGGAGTCAAGGTAGAACACAGACGCAAAGTAGCAGAGCTTCTTTCAATGATGGGTTCTTTGCGCCCACAATCCTCAGAAAGGAAATCAAAATGGGTCGTGATAAGGAGGCAGCTTTTGCAGGAACTGAATTTAGCAGATGCTATGGTAAATAGGTTACAGACTGTAGGTTTAAGATTCTGTGGATCTGCTGATCAGGCACTCCCCCGGTTAAGAGGAGCTCTTCCATCTGATAAACCTTCATTTAAGGCACTTGATGAATTGTCTGAGCTTGTCAATCTCTTGAGAATTTGGAGGATTAACAAAAATATCTATATAGATGCATTAATGCCACCAACTGAAAGTTATCATAGAGATCTGTTTTTTCAGGTATACTTAAGGAAGGAGAACAGTCCTGGATCTCTCTCTGAAGGTGCCTTGCTGGCTGTTGGTGGTCGATATGACTATTTGCTTCAACAGTTGTGGAGTAGTGACTATAAAGGAAATCCTCCCACGGGTGTGGGAACTAGCCTTGCACTGGAGACAATAATTCAGAATTGTCCTGTAGATTTCAAGCCCAATAGAAACGAAATCAGCACCAATATTCTTGTTTGTTCTAGAGGTGGAGGTGGTCTTCTGGTGGAGCGCATGGAACTAGTTGCTGAATTATGGGAGGAGAACTTTAAGGCTGAATTTGTTCCTACCCCTGATCCAAGTCTTACAGAGCAGTATGAGTATGCTAATGAACATGGTATCAAATGTCTTGTCATCATCACAGATACAGATTTCTCATTGACAGGTTTTGTTAAGGTTCGACACCTTGAACATAAGAAGGAGAAAAATGTTGAGAAAAAAAACCTAGTCAAGTTTCTATCGGATGCTATGGCAACACAATTTAGAAATCCCTCCATTTGGATTTGA 3702 0.4168 MGHSSNKKKKRGAGGGSGRRNKGRTQSKDHASQFGADDYEHLSEEITALCAIFEEDFKVLPGSPPRVVIKLKPYSKGMGYEDLDVSAVLAVRCLPGYPFKCPKLQITPEKGLSEADANKLLSLLQDQATLNAREGRVMIYNLVEAAQEFLSGIEPIAKTNDSKLLHSTVESNEELFPKDMSSINKKGSFVYGFIDLFSGCGETWNWGFGMDETAGKSSLPPSKLDASKPREKKSDSKETPLIMQELPAKLDTVGEVSEESNNSLSLSPSSRSLVEDFTGNGNEGEKEYFIIDEYTTEDNEGINESESSESLSSESLPHHQLSPTVEKDLIMVHMLRLVCASKGTLADCLPQVVTDLYNLGVISDSARDMASEPPSMFNKTFDRVFQKHLASSRLSQFWKPDLGGSNTVPHSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRQYAVKKIRLKDKTMPDRILREVATLSRLQHQHVVRYYQAWFETGVSDSYGDSAWGSKTTVSSTFSYKAATSNDAFGPENQIESTYLYIQMEYCPRTLRQVFESYNHFDKKLAWHLFRQIVEGLAHIHGQGIIHRDLTPSNIFFDARNDIKIGDFGLAKFLKLEQLDQDLGHPADATGVSIDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELWHPFGTAMERHVVLSDLKQKKEVPPTWVAEFPEQESLLQQLMSPAPSDRPSATELLQNAFPQRKESELLDDILRTMQKSEDTSIYDKVLNAIFDEEMLSTNHIHQVGRLGSVGDNSSSIQYTEFKTEVRDYVVDVNREIFRQHCAKHLEISTMRLLDDCPQFNSRNAVKLLTHGGDMLELCHELRLPFVNWIISNQKSSFKQYEISRVFRRAVGHSSPNHYLQGDFDIIGGTSALTEAEVIKVTWDIVTCFFHEDSCDIHLNHGALLDAIWSWIGVKVEHRRKVAELLSMMGSLRPQSSERKSKWVVIRRQLLQELNLADAMVNRLQTVGLRFCGSADQALPRLRGALPSDKPSFKALDELSELVNLLRIWRINKNIYIDALMPPTESYHRDLFFQVYLRKENSPGSLSEGALLAVGGRYDYLLQQLWSSDYKGNPPTGVGTSLALETIIQNCPVDFKPNRNEISTNILVCSRGGGGLLVERMELVAELWEENFKAEFVPTPDPSLTEQYEYANEHGIKCLVIITDTDFSLTGFVKVRHLEHKKEKNVEKKNLVKFLSDAMATQFRNPSIWI 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0365 1233 SUPERFAMILY Class II aaRS ABD-related 1126 1223 - -
Aed5g0365 1233 MobiDBLite consensus disorder prediction 215 274 - -
Aed5g0365 1233 ProSitePatterns Protein kinases ATP-binding region signature. 424 448 IPR017441 GO:0005524
Aed5g0365 1233 SUPERFAMILY Class II aaRS and biotin synthetases 785 1112 IPR045864 -
Aed5g0365 1233 Pfam Histidyl-tRNA synthetase 869 1110 IPR041715 -
Aed5g0365 1233 MobiDBLite consensus disorder prediction 1 17 - -
Aed5g0365 1233 SMART RWD2001b 44 153 IPR006575 GO:0005515
Aed5g0365 1233 CDD STKc_EIF2AK4_GCN2_rpt2 411 718 - -
Aed5g0365 1233 Gene3D Phosphorylase Kinase; domain 1 406 534 - -
Aed5g0365 1233 ProSiteProfiles RWD domain profile. 44 153 IPR006575 GO:0005515
Aed5g0365 1233 SUPERFAMILY UBC-like 39 150 IPR016135 -
Aed5g0365 1233 Gene3D Bira Bifunctional Protein; Domain 2 780 1117 IPR045864 -
Aed5g0365 1233 MobiDBLite consensus disorder prediction 305 319 - -
Aed5g0365 1233 Pfam Anticodon binding domain of tRNAs 1128 1225 IPR024435 -
Aed5g0365 1233 MobiDBLite consensus disorder prediction 225 239 - -
Aed5g0365 1233 PANTHER HISTIDYL-TRNA SYNTHETASE 23 1233 - -
Aed5g0365 1233 Gene3D Ubiquitin Conjugating Enzyme 32 158 IPR016135 -
Aed5g0365 1233 ProSiteProfiles Protein kinase domain profile. 418 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0365 1233 MobiDBLite consensus disorder prediction 255 274 - -
Aed5g0365 1233 MobiDBLite consensus disorder prediction 1 36 - -
Aed5g0365 1233 Gene3D - 1124 1223 IPR036621 -
Aed5g0365 1233 Pfam Protein kinase domain 418 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0365 1233 ProSitePatterns Tyrosine protein kinases specific active-site signature. 573 585 IPR008266 GO:0004672|GO:0006468
Aed5g0365 1233 Pfam RWD domain 41 150 IPR006575 GO:0005515
Aed5g0365 1233 PANTHER EIF-2-ALPHA KINASE GCN2 23 1233 - -
Aed5g0365 1233 SUPERFAMILY Protein kinase-like (PK-like) 414 723 IPR011009 -
Aed5g0365 1233 MobiDBLite consensus disorder prediction 299 319 - -
Aed5g0365 1233 MobiDBLite consensus disorder prediction 22 36 - -
Aed5g0365 1233 Gene3D Transferase(Phosphotransferase) domain 1 537 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0365 Aed-Chr5 2564074 2586119 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0365 424 721 MAP Kinase Kinase Kinase AT1G63700 25.649 6.44e-22 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Aed5g0365 Pkinase 3.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0365 K16196 - gmx:100797996 2238