Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0344 ATGCGAACCCTCTGCGACGTATGCGAGAGCGCCGCTGCCATTCTCTTCTGCGCCGCTGATGAGGCTGCTCTCTGCTCCGCTTGTGACCACAAGATAGATGGCAGTTCGCTGTGTCTGCAATGTGATATGCTTGTTCATGTTGGTGGTAAAAGAACCCATGAAAGATATCTTCTATTGAGGCAAAGAGTTCAGTTTCCAGGTGATAAACCTGCACAAATGGAAGACCTAGCGCTGCAACCGATGGATCAAAATGAATTGAGGAGGGATGAAAGTCAGTCACTCAAGCTAAAAACAAGAGATAGTCAGCAGAATCACAGTGTCTCACCTGTTCCAAGGCAGGAAAATAATATTGATGGTCATGGAAAAATGGATAAAAAGTTATTTGATCTTAATACCAGGCCACTGCGGTTAAATGGACCAGCACCAAACAGCCAGGAACAAGGTATGGATATTTTAAGAGGCAATAATCATGAGTCTGCGAATGTGCCACCAGTAGAATCCTTCAAGCAAGAGGCTGAGAAGTAA 525 0.4495 MRTLCDVCESAAAILFCAADEAALCSACDHKIDGSSLCLQCDMLVHVGGKRTHERYLLLRQRVQFPGDKPAQMEDLALQPMDQNELRRDESQSLKLKTRDSQQNHSVSPVPRQENNIDGHGKMDKKLFDLNTRPLRLNGPAPNSQEQGMDILRGNNHESANVPPVESFKQEAEK 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0344 174 MobiDBLite consensus disorder prediction 117 131 - -
Aed5g0344 174 PANTHER B-BOX ZINC FINGER PROTEIN 19 31 174 - -
Aed5g0344 174 ProSiteProfiles Zinc finger B-box type profile. 1 28 IPR000315 GO:0008270
Aed5g0344 174 PANTHER B-BOX ZINC FINGER PROTEIN 19 1 32 - -
Aed5g0344 174 MobiDBLite consensus disorder prediction 137 154 - -
Aed5g0344 174 MobiDBLite consensus disorder prediction 73 174 - -
Aed5g0344 174 SMART bboxneu5 1 58 IPR000315 GO:0008270
Aed5g0344 174 MobiDBLite consensus disorder prediction 81 96 - -
Aed5g0344 174 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 32 - -
Aed5g0344 174 PANTHER B-BOX ZINC FINGER PROTEIN 22 31 174 - -
Aed5g0344 174 MobiDBLite consensus disorder prediction 97 113 - -
Aed5g0344 174 CDD Bbox1_BBX-like 4 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0344 Aed-Chr5 2419894 2422245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0344 1 174 C2C2-CO-like Transcription Factor Family AT4G38960 42.453 7.07e-47 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0344 - - gmx:100527369 279.641