Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0337 ATGGCAGAAAATGAAGAAGCGACGACGAATGACATGATGCAGAGGCTTCACTTTCTGAAGCAGCCGTTAAACATGGAGCAGCTTAGCATCCCGCAATTCAGCCCCTCGCAAATGCGCGCGAGGCATCATCAGCATCAGCATCAGTTCGACGGTGGGAACAGTAACAAGCGCGCGGGCATACCACCCTCGCACCCGCACCAGATCCCGCCCATTTCGCCGTACTCTCAGATCCCGGTGTCGCGTCAGCACAGCAACATTTCCCCTACACCCACCCACACGCGATCACTCTCGCAGCCCTCGTTTTTCTCGCTGGATTCCCTCCCTCCCCTCAGCCCCTCCCCCTTCCGCGACTCCTCCTCGACTTCCGTGTCCGAAGCTGCTGACGTGTCAATGGAAGATCGCGACGTGAGTTCTCATTCTCATTCTCATTCCCTTTTGCCACCCTCACCTTTCTCCAGAACACTCAACAACAGCAATTTACCTTTACCCCCTCGCAAAGCTCACAGACGCTCTAACAGTGACATTCCGTTCGGGTTTTCCACCGTTTTGCAATCCTCGCCGCCACTTATCCCTCTTCGGAACCCCGTTTCAGCGAAACCCGCTCAGTTGGTGAAACGGGAAGCGTCGTGGGACAGGGGTGTTGAGCATAGTAATGTAGAGGGATCCGGGGAGAAGAAATCCCCTGAAGGGGAAGTGGTGGATGATCTTTTCTCTGCTTACATGAATTTGGATAGCTTTGATGCCTTGAACTCTTCTGGAACCGATGATAAAAACGGGGCCGAAAATCGCGATGATTTGGACAGTAGAGCGAGTGGGACTAAGACTAATGGTGGTGACAGCAGTGATAATGAAGCCGAGAGTAGTGTTAATGAGAGTGGGGATATTGGTGGGGTGAGGGAGAAGAAGAGGAGTGCTGGGGGTGAGATTGCACCCTCCTCCAGGCACTATAGGAGTATCTCCATGGATAGTTTTATTGGGAAGTTAAATTTCGGTGACGAGTCGCCCAAGCTGCCTCCTTCGCCGGGGCAGAGGACCGGTTTGATTTCCTCTGCTGGTGGAATTGATGGCAATTCGGCTGCCTTCAGCTTGGAGTTTGGAAATGGGGAGTTTAGTGGGCCTGAGTTGAAGAAAATTATGGCCAATGAAAAGCTTGCTGAGATTGCCTTGACCGATCCAAAGCGTGCCAAAAGGATTTTGGCCAATCGGCAATCGGCTGCACGATCCAAAGAGAGGAAGATGCGGTACATTTCGGAGCTAGAACACAAGGTTCAGACTCTACAGACGGAAGCCACCACGCTATCTGCACAGCTTACTCTGTTACAGAGAGATTCTGCTGGACTCACTAACCAGAATAGTGAGTTGAAGTTTCGCCTTCAATCCATGGAACAACAAGCAAAGCTCCGAGATGCTCTAAATGAGGCACTTACTGCTGAAGTTCAAAGACTAAAGATTGCTACAGCTGAATTGAGTGGGGATTCGCATGGTTCTAGCTGTTTGATTCCTCAACATTCAGTTAACCCTCTCATGTTCCAGCAGCAGCCTCCAACTGCATCCCAACAAAACATTCATCTTCAACAGCAACAGCAACAGAATGGCAATGCCAACTCAAATTCCGACTTAAAACAATAA 1629 0.5064 MAENEEATTNDMMQRLHFLKQPLNMEQLSIPQFSPSQMRARHHQHQHQFDGGNSNKRAGIPPSHPHQIPPISPYSQIPVSRQHSNISPTPTHTRSLSQPSFFSLDSLPPLSPSPFRDSSSTSVSEAADVSMEDRDVSSHSHSHSLLPPSPFSRTLNNSNLPLPPRKAHRRSNSDIPFGFSTVLQSSPPLIPLRNPVSAKPAQLVKREASWDRGVEHSNVEGSGEKKSPEGEVVDDLFSAYMNLDSFDALNSSGTDDKNGAENRDDLDSRASGTKTNGGDSSDNEAESSVNESGDIGGVREKKRSAGGEIAPSSRHYRSISMDSFIGKLNFGDESPKLPPSPGQRTGLISSAGGIDGNSAAFSLEFGNGEFSGPELKKIMANEKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSAGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKIATAELSGDSHGSSCLIPQHSVNPLMFQQQPPTASQQNIHLQQQQQQNGNANSNSDLKQ 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0337 542 SUPERFAMILY Leucine zipper domain 393 444 IPR046347 GO:0003700|GO:0006355
Aed5g0337 542 SMART brlzneu 389 453 IPR004827 GO:0003700|GO:0006355
Aed5g0337 542 CDD bZIP_plant_RF2 394 445 IPR044759 GO:0003700|GO:0006355
Aed5g0337 542 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 96 539 - -
Aed5g0337 542 MobiDBLite consensus disorder prediction 203 230 - -
Aed5g0337 542 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 391 454 IPR004827 GO:0003700|GO:0006355
Aed5g0337 542 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN 96 539 - -
Aed5g0337 542 MobiDBLite consensus disorder prediction 73 127 - -
Aed5g0337 542 MobiDBLite consensus disorder prediction 271 290 - -
Aed5g0337 542 MobiDBLite consensus disorder prediction 205 230 - -
Aed5g0337 542 Pfam bZIP transcription factor 393 451 IPR004827 GO:0003700|GO:0006355
Aed5g0337 542 MobiDBLite consensus disorder prediction 141 161 - -
Aed5g0337 542 Gene3D - 393 444 - -
Aed5g0337 542 MobiDBLite consensus disorder prediction 513 542 - -
Aed5g0337 542 MobiDBLite consensus disorder prediction 250 314 - -
Aed5g0337 542 MobiDBLite consensus disorder prediction 35 173 - -
Aed5g0337 542 Coils Coil 409 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0337 Aed-Chr5 2381247 2384852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0337 6 512 bZIP Transcription Factor Family AT4G38900 56.490 3.64e-173 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed5g0337 bZIP_1 2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0337 - - gmx:778145 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0337 5 2381247 2384852 Aed5g0337 5 2381247 2384852 ECH