Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0336 ATGGCCGCAGCAGCAGCAGCAGCAGCACCACCCACTCTCTCCAAACCATCCTCTCTCCCTTTTCAAACCCACTCTTTCCCTAAAATCCTCCCCAGTCGCCCCCACGCCGCCGTTAAACACCCTCTCCTCGTTCTCTCCAAAAAAAACCCGATTTCCGACATCGTCTCATACACCCCGGCACCGCCACGCGACTCGGAAGGCGCGTGGGACGACGAGAAGCCGCGCGAGGAGTGCGGCGTGGTGGGGATATACGGCGACCCGGAGGCCTCGCGATTGTGCTACCTTGCCCTCCACGCGCTCCAGCACCGCGGGCAGGAAGGCGCCGGAATCGTGACGGTGAACAACAACGTGCTCCAATCCATCACCGGAGTGGGTCTCGTCTCCGACGTGTTCAACCAGTCGAAGCTCGACCAACTCCCCGGCAGCCTCGCCATCGGGCACGTCCGCTACTCTACCGCGGGGCAATCCATGCTCAAAAACGTTCAGCCTTTCGTCGCCGGCTACCGCTTCGGCTCCGTCGGGGTGGCCCACAACGGCAACCTCGTCAACTACCGAACCCTCCGAAGCAACCTCGAGGACAGCGGCTCCATCTTCAACACCACCTCCGACACCGAGGTTGTTCTCCACCTCATCGCCACCTCCAAACACAGACCATTCATTCTTCGAATCGTCGACGCCTGTGAGAAACTCGAAGGGGCTTATTCCATTGTCTTCGTCACAGAGGACAAACTCGTCGCCGTTCGCGACCCCTTCGGGTTTAGACCCTTGGTCATGGGAAGGAGAAGTAACGGTGCCGTCGTTTTCGCCTCTGAAACCTGCGCTTTAGACCTAATTGAAGCGACTTATGAAAGGGAGGTTTACCCCGGTGAGGTTCTCGTGGTGGATAAAAATGGTATTCAGAGTCTCTGCCTCATGTCTCATCCACAACCGAAACAATGCATTTTTGAGCATATTTACTTTGCACTTCCCAATTCAGTTGTTTTTGGTAGGTCTGTGTATGAGTCTCGTAGACAATTTGGGGAGATTTTGGCTACAGAGAGTCCTGTTGACTGTGATGTTGTGATTGCTGTGCCTGATTCTGGTGTTGTGGCTGCTCTTGGTTATGCTGCAAAGGCTGGGGTTCCCTTTCAGCAGGGTTTGATTAGGTCACACTATGTGGGCAGGACTTTCATTGAGCCCTCTCAGAAGATTAGGGACTTCGGTGTGAAGCTGAAGCTATCGCCAGTTCGTGCCGTGCTTGAGGGTAAGCGTGTTGTGGTTGTGGATGATTCCATTGTGAGAGGAACCACCTCGTCCAAGATTGTGAGGCTGTTGAAGGAGGCTGGTGCTAAGGAGGTTCACATGAGGATTGCGAGCCCTCCGATTATTGGTTCTTGTTACTATGGTGTGGATACTCCCAGCTCTGAAGAGTTGATTTCGAATAGGATGAGCGTGGAGGAGATAAGAGACTTTATTGGGTCGGATTCTCTGGCCTTTTTACCCTTTGACAGCTTGAAGAGGTTGTTGGGAACTGAAAGTCCGAATTTTTGTTATGCTTGTTTCTCTGGGAATTACCCTGTGGAGCCAAGAGAGCTTAAGGTGAAGAGGGTTGGGGACTTTGTGGATGATGGCTTGAATGGGAGCTTGGAGTCTATTGATGGTGGTTGGGTGCAAGCAAACCGAAATCAAATCAAGGTTGGTACTGGATTTTCTTGGAATACACCTTGGAAGGATGATCTCCATCTCCTTTAA 1731 0.5292 MAAAAAAAAPPTLSKPSSLPFQTHSFPKILPSRPHAAVKHPLLVLSKKNPISDIVSYTPAPPRDSEGAWDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVNNNVLQSITGVGLVSDVFNQSKLDQLPGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRSNLEDSGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLEGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVYPGEVLVVDKNGIQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRQFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVEEIRDFIGSDSLAFLPFDSLKRLLGTESPNFCYACFSGNYPVEPRELKVKRVGDFVDDGLNGSLESIDGGWVQANRNQIKVGTGFSWNTPWKDDLHLL 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0336 576 SUPERFAMILY PRTase-like 313 524 IPR029057 -
Aed5g0336 576 TIGRFAM purF: amidophosphoribosyltransferase 78 519 IPR005854 GO:0004044|GO:0009113
Aed5g0336 576 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 78 297 IPR017932 -
Aed5g0336 576 Pfam Glutamine amidotransferase domain 156 275 IPR017932 -
Aed5g0336 576 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 68 550 - -
Aed5g0336 576 Pfam Phosphoribosyl transferase domain 352 447 IPR000836 -
Aed5g0336 576 CDD PRTases_typeI 340 451 IPR000836 -
Aed5g0336 576 CDD GPATase_N 78 328 IPR035584 -
Aed5g0336 576 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 78 519 IPR029055 -
Aed5g0336 576 Gene3D - 337 501 IPR029057 -
Aed5g0336 576 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 78 301 IPR029055 -
Aed5g0336 576 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 68 550 - -
Aed5g0336 576 Hamap Amidophosphoribosyltransferase [purF]. 77 518 IPR005854 GO:0004044|GO:0009113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0336 Aed-Chr5 2371961 2374178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0336 62 551 PRT Gene Family AT2G16570 84.959 0.0 860
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0336 K00764 - gmx:100801720 1035.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0336 5 2371961 2374178 Aed5g0336 5 2371961 2374178 ECH