Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0311 ATGTCCAAATACTACTCCATGACAATGGGTAGCAGCACAATAAGCTTTAGTTCTTCTTCCAATCATGTTTCAAGCACGAGCAAATGGCTGGGGTTCGTGGCGGCCGTGTGGATTCAATGCATCTCCGGCAACAATTACACTTTCTCCAACTACTCCGACGCCCTCAAATCCCTCATGCACCTCACTCAGGTCCAGCTCAACAACCTCTCGGTGGCCAAAGACGTGGGCAAAGCCTTTGGGCTTCTAGCGGGCCTGGCATCGGACCGCTTCCCGACCTGGGTCATTCTCCTGATAGGCTCCGTGGAAGGCCTAATTGGCTACGGAGCCCAATGGCTGGTTGTTAGCCAGAGAATAGATCCCCTCCCCTACTGGCAGATGTGTGTATTTCTGTGCATGGGAGGGAACAGCACAACGTGGATGAACACTGCCGTTTTGGTTACATGCATTCGGAACTTCCGTTCTAACAGAGGACCCGTTTCCGGGATTCTCAAAGGCTTTGTAGGCTTGAGCACTGCCATTTTCACTACTCTCTGTTCTGCTCTCTTTGCCGATGACCCTGCCTCCTTCCTCATCATGCTCTCTGTCGTCCCCTTCGCAGTTTGCCTCACCGGCGTGTTTTTCCTACGCGAGATTCCTCCCGCCGTCACCGTCGACTCCGTCGAAGAAGAGGTAAAGTACTTCGGCGTGTTCAACGTCGTGGCCGTCTTGGTGGCGGTTTTTCTGTTGGCGTATGGGTTCCTCCCCAGCCCCGGCACGTTGGTGTCGCGGGTGTTCGTGGCGGTTTTGGTTGTTATGCTGGCTTCGCCGTTGGGGATCCCGGTTTACTCCTACTTGAAGGAGCGGCGGTGGTTCAGACAGGGGAGTGATTTGGAGGGGCAGAGTGTGGACGAACCGTTGCTTCAGAGTCCGGAGAAGGAGAAGGAGAAGGAGATAGTGAAGAGGGCGCCGGTGTTGGGCGAGGAGCATACTATAGTGGAGGCGCTGAGAAGCGTGGATTTTTGGATCTTGTTCGTGTCGTTTCTGTGTGGGGTTGGAACGGGTTTGGCAGTGATGAACAATATGGGTCAAATCGGGTTGGCGCTTGGATACCCGGATGTCTCGCTATTTGTGTCCTTGACTAGCATTTTTGGTTTCTTTGGACGAATCATATCGGGTACCATTTCGGAGTTCACCATCAAGAAAGCTGCAACACCTAGACCTCTTTGGAATGCATCATCTCAGCTTCTAATGGCTGTAGGTTACATACTCATGGCCATGGCTATGCCAGGTTCCCTATACATTGGGTCTATTTTAGTAGGCATATGTTATGGAGTGAGGCTAGCCATTACAGTGCCAACAGCCTCAGAGTTATTTGGACTAAAATACTATGGTCTGATCTACAATATTCTGATCCTTAACCTGCCTCTGGGCTCTTTCATATTCTCTGGGCTGCTTGCTGGCATACTGTATGATATGGAGGCAACTACAACTGAGGGAGGAGGCAACACCTGTGTTGGAGGTCATTGTTACAGGCTAGTCTTCATTGTCATGACTGGAGCATGCATTGTTGGCTTCTTCTTAGACATTCTCTTGTCATTCAGAACCAAGAATATTTACACCAAGATTTCCATCAGCAAGAAATCCTCACCGACATCGATCAAATAG 1644 0.5067 MSKYYSMTMGSSTISFSSSSNHVSSTSKWLGFVAAVWIQCISGNNYTFSNYSDALKSLMHLTQVQLNNLSVAKDVGKAFGLLAGLASDRFPTWVILLIGSVEGLIGYGAQWLVVSQRIDPLPYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRSNRGPVSGILKGFVGLSTAIFTTLCSALFADDPASFLIMLSVVPFAVCLTGVFFLREIPPAVTVDSVEEEVKYFGVFNVVAVLVAVFLLAYGFLPSPGTLVSRVFVAVLVVMLASPLGIPVYSYLKERRWFRQGSDLEGQSVDEPLLQSPEKEKEKEIVKRAPVLGEEHTIVEALRSVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYPDVSLFVSLTSIFGFFGRIISGTISEFTIKKAATPRPLWNASSQLLMAVGYILMAMAMPGSLYIGSILVGICYGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSFIFSGLLAGILYDMEATTTEGGGNTCVGGHCYRLVFIVMTGACIVGFFLDILLSFRTKNIYTKISISKKSSPTSIK 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0311 547 SUPERFAMILY MFS general substrate transporter 27 530 IPR036259 -
Aed5g0311 547 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 304 542 - -
Aed5g0311 547 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 19 310 - -
Aed5g0311 547 Pfam Nodulin-like 28 274 IPR010658 -
Aed5g0311 547 Gene3D MFS general substrate transporter like domains 296 539 IPR036259 -
Aed5g0311 547 CDD MFS_Mch1p_like 28 517 - -
Aed5g0311 547 Gene3D MFS general substrate transporter like domains 25 225 IPR036259 -
Aed5g0311 547 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 304 542 - -
Aed5g0311 547 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 19 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0311 Aed-Chr5 2125213 2128109 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0311 28 544 Nodulin-like Gene Family AT4G34950 68.909 0.0 760
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0311 - - gmx:100800237 869.766