Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0307 ATGGCTTCCCTATATGATGTGCTTGGAATCTCTGTGTCTGCAAGCGGTGTTGAAATAAAAAGTGCTTACAGAAAGCTGGCAAGAACACACCATCCTGATGTTGTGGCCATGAATCAGAAGGAAAGCTCAGCGAACCAATTCATGATGATCCATTCAGCTTACTCAACTCTGTCTGACCCAGAGAAGCGAGCTCAGTATGATACTGAAATCAATAGACACAGAAGAAATCACAGTACAGTTTCCTATGCTACAACAAGAGGAAGGAAATGGGAAACCGACCAATGTTGGTAG 291 0.433 MASLYDVLGISVSASGVEIKSAYRKLARTHHPDVVAMNQKESSANQFMMIHSAYSTLSDPEKRAQYDTEINRHRRNHSTVSYATTRGRKWETDQCW 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0307 96 Pfam DnaJ domain 4 67 IPR001623 -
Aed5g0307 96 PANTHER DNAJ PROTEIN HOMOLOG-LIKE 2 96 - -
Aed5g0307 96 SMART dnaj_3 2 62 IPR001623 -
Aed5g0307 96 Gene3D DnaJ domain 1 91 IPR036869 -
Aed5g0307 96 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 2 96 - -
Aed5g0307 96 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Aed5g0307 96 ProSiteProfiles dnaJ domain profile. 3 70 IPR001623 -
Aed5g0307 96 CDD DnaJ 5 59 IPR001623 -
Aed5g0307 96 SUPERFAMILY Chaperone J-domain 2 74 IPR036869 -
Aed5g0307 96 PRINTS DnaJ domain signature 23 38 IPR001623 -
Aed5g0307 96 PRINTS DnaJ domain signature 5 23 IPR001623 -
Aed5g0307 96 PRINTS DnaJ domain signature 42 62 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0307 Aed-Chr5 2091385 2091675 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0307 5 68 C2H2 Transcription Factor Family AT1G74250 45.588 7.76e-12 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0307 - - gmx:100798520 156.762