Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0300 ATGGCGGCTACTGTGTCTTCAGCGTGGTCAAAGCCCGGAGCTTGGGCCCTCGATTCCGAGGAACACGAAGCCGAACTCCTCCAACAGACCAACCCCAACCCCAACGAGAAGCCACTCGCCGACTTCCCCTCCCTCGCCGTCGCCGCCGCAACCAAGCCCAAAAAGAAGAAGGCCCAGACCTACTCCCTCGCCGAATTCACCGCCAAGCCCGACACCTCCTACGCCGACCAAGATCCCGTCCTCCTCCCCACTGGTCCCCGCCAGCGCTCCGCCGAGGAGCTCGACCGCACCCGTCTCGGCGGCGGCTTCCGAAGCTACGGAGACCGCCCCAACAGAAACTCATCCGGCGGCGACGAGTCTTCCAATTCCCGCTGGGGTTCATCTAGGGTTTCTGACGAGCCGAGGCGAAACGGTTCTTTTGGGGCTAGGGATTCCAATCGCGAGCTGCCCCCTTCCCGCGCTGATGAAACTGATAATTGGGCAGCCGCCAAGAAACCCTCTGGGGGGTTCGAGAGGAGGGAGAGGGACAGAGGAGGCTTTTTCGATTCGCAGTCTCGCGCCGACGAATCTGACAGCTGGGTTTCGAATAAGAGCTTTGTGCCCTCCGAAGGCCGGAGATTTGGCTCCAACGGTGGCGGCGGAGGCGGCTTTGAAAGAGAGAGGAGGGTTGTTGGATTCGGCTCAAGCGGCGGCGCGGATTCAGACAATTGGAACAACAACAAGAAGGTAGAGTCCAACGTTGTTGGTAGCGAGAGTGTTGGTGGGAGGCCGAGGCTTGTGTTGCAACCTCGGACAACACTATCGGTGAACAATGAAGGGGCTGATGCGGGGAAGCCTAAAGGGGTTAATCCGTTCGGAGAGGCGAGGCCGAGGGAGCAGGTCTTGGCCGAGAAAGGGCAGGATTGGAAGAAGATTGATGAGCAGCTTGACAGCGTCAAGATTAAGGAGACAGCTGCTGCTGCTGATAGCTTTGGAAAGAGGGGTTTTGGATCCCCTAACGGTGGAGGAGGCCGTACTAGTACTTTGCCTGAAAGTCGCGCTGAGAGAAGTTGGAGAAAGCCCCAATCTGATGATGATCGCCCTAAAAGTGCTGAGAAAGTGGAAGATGAGCCTGCTCAAAAAAAGAAAGTGGAAGATGAACACGTTGAAGAAAATTGA 1158 0.5751 MAATVSSAWSKPGAWALDSEEHEAELLQQTNPNPNEKPLADFPSLAVAAATKPKKKKAQTYSLAEFTAKPDTSYADQDPVLLPTGPRQRSAEELDRTRLGGGFRSYGDRPNRNSSGGDESSNSRWGSSRVSDEPRRNGSFGARDSNRELPPSRADETDNWAAAKKPSGGFERRERDRGGFFDSQSRADESDSWVSNKSFVPSEGRRFGSNGGGGGGFERERRVVGFGSSGGADSDNWNNNKKVESNVVGSESVGGRPRLVLQPRTTLSVNNEGADAGKPKGVNPFGEARPREQVLAEKGQDWKKIDEQLDSVKIKETAAAADSFGKRGFGSPNGGGGRTSTLPESRAERSWRKPQSDDDRPKSAEKVEDEPAQKKKVEDEHVEEN 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0300 385 MobiDBLite consensus disorder prediction 66 290 - -
Aed5g0300 385 MobiDBLite consensus disorder prediction 231 247 - -
Aed5g0300 385 MobiDBLite consensus disorder prediction 318 385 - -
Aed5g0300 385 MobiDBLite consensus disorder prediction 108 134 - -
Aed5g0300 385 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 367 IPR010433 GO:0003743
Aed5g0300 385 MobiDBLite consensus disorder prediction 185 203 - -
Aed5g0300 385 MobiDBLite consensus disorder prediction 1 43 - -
Aed5g0300 385 MobiDBLite consensus disorder prediction 167 184 - -
Aed5g0300 385 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 1 367 - -
Aed5g0300 385 Pfam Plant specific eukaryotic initiation factor 4B 6 320 IPR010433 GO:0003743
Aed5g0300 385 MobiDBLite consensus disorder prediction 345 385 - -
Aed5g0300 385 MobiDBLite consensus disorder prediction 136 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0300 Aed-Chr5 2069604 2072760 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0300 1 353 Eukaryotic Initiation Factors Gene Family AT4G38710 52.618 2.67e-70 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0300 - - gmx:100820014 602.053