Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0272 ATGTCGCGCCAGTCGACGACGTCTGCTTTCACTAAATCGAAGACCCTCGACAATAAATATCAAGAGATTGATTTGTTAAAGAATTTGAACCACAAAAACATTGTAAAGTATCTTGGATCTTCAAAGACAAAAAGTCACCTGCACATAGTTCTTGAGTATGTGGAGAATGGCTCACTTGCAAATATTATCAAGCCAAATAAATTTGGTCCTTTTCCAGAATCATTGGTTGCGGTATATATTGCCCAGGTGTTGGAAGGTTTGGTTTATCTACATGAACAGGGTGTTATCCATCGGGATATTAAGGGTGCAAACATATTGACAACTAAAGAGGCAAGCCTTCTAGGTCTTGTCAAACTTGCTGATTTTGGTGTTGCTACAAAATTAACAGAGGCTGATGTTAACACTCATTCAGTTGTTGGAACACCTTACTGGATGGCCCCAGAGGTTATAGAAATGGCTGGGGTTTGTGCAGCTTCTGACATTTGGAGTGTTGGCTGTACGGTTATTGAACTTCTTACATGTATACCTCCTTATTACGATTTGCAGCCTATGCCGGCTCTTTTCCGGATCGTCCAGGATGAGCATCCACCAATTCCAGATAGCCTTTCACCTGATATTACTGATTTTCTGCTTCAATGCTTTAAGAAGGATAGCAGACAAAGGCCTGATGCTAAAACTCTGCTGTCTCACCCCTGGATTCAAAACTGTAGACGTGCCCTGCAGTCTTCTCTTCGTCATAGTGGAACACTAAGAAATATAGAGGAAGATGATTCTGCTGATGCAGAAATTTCTCATGGTGATCAAAAGAGTGCTTATGAGAACTCTTCTATTGAGAAAGAGGACTCTTCAAAAGAGCTTACAACTGTGGCTGCTGATAGCAGCATAGCTAATGAAGACAATGTTTCAGAGAAGGCAGATGATGTTCCATCAGATCAGGTTCTTACCTTAGCCATTCGTGAGAAGTCATTTCTACAAACTAGTTCTAGCAAACTCTCTTCTAGTAGAGAAGGGGTTAATTCCGAGTCAACCGGCAATCATGAAATTTCAAATGCTAAAGACCTTCATGAAGTTATGATGAATGGAGAAGATGGAGCTCCACAATCAAGAGGAATGGCTAGCAAGGTTGGAGGAAAAGACAGTTCTGTAAACAATGGCAACAAATCATTTGCTTTTGGGCCAAGAGGTCAAGATAATGGTTCCCTTAAGGCAATGAAGATGCCAACCGCTGTGGAAGGAACTGAGCTCAGTAGATTTAGTGACCCGCCAGGAGATGCCTACTTGGATGATTTATTTCATCCATTGGATAAACCACCTGGGGAGGTTGTAGCAGAGGCGTCCACATCTACATCCACTTCACATATGGCTAAAGGTAATGCATCTACATCTGATGGTGGGAAAAATGACCTGGCTAAAGAGTTGAGGGCTACAATTGCTCGAAAGCAATGGGAGAAGGAGAGTGAAATTGGACAGGCAAACAATGGTGGGAATCTTTTGCACCGAGTGATGATAGGTGTTCTAAAAGATGATGTTATTGATATAGATGGTTTGGTCTTTGATGAAAAACTTCCTGGAGAGAACCTTTTCCCTTTGCAGGCTGTTGAGTTCAGCAAACTAGTCGGTTCATTAAAACTAGAGGAATCAGAAGATGTGATTGTTTCTGCATGCCAGAAACTTATTGGTATATTTCACCAACGTCCAGAGCAGAAGATTGTTTTTGTTACTCAGCATGGGTTACTTCCTCTAACAGATTTGCTAGAAGTTCCAAAAACACGTGTCATATGTTCTGTGCTTCAGCTTATAAATCAAATAGTTAAAGACAACACTGATTTTCTAGAAAATGCATGTCTTGTTGGATTGATTCCTGCAGTCACAAGTTTTGCAGTACCTGATCGTCCTCGAGAGATTCGTATGGAAGCAGCATATTTTTTACAGCAACTTTGTCAGTCAAGCTCTTTGACATTACAAATGTTTATAGCTTGCCGTGGAATACCTGTTTTAGTGGGATTTCTTGAGGCTGATTATGCCAAGTACAGGGAGATGGTTCATCTGGCTATTGATGGCATGTGGCAAGTATTTAAGCTTCAGCAGTCAACGCCTAGAAATGATTTTTGCCGGATAGCTGCTAAGAATGGAATACTTCTCAGGCTTATAAATACTCTTTATAGTTTAAATGAGTCAACTCGACTAGCATCTAGCTCCGCTGGGGGTGGATTTTCAGTTGATGGTTCAGTTCAACGCCCACGATCTGGTATCTTGGATCCCACTCACCCGTATATCAATCAGAATGAGACAGTTCTATCTTCAGTAGATCAGCAAGATCCCCCTAAAGTGAGACGTGGAGTACCTGATCATCACTTAGAACCTTCATCATCCAATCCCCGAAGATCAGATGCTAACTACCCCGTGGATGTTGATAGACCCCAATCAAGCAATGCAGCAGCTGATGTTGTGCCACTGGAGAAGAGTTCAACCCAAGCATCCAGAGAATCTTCAGCAGGTGCATTGAAAGAACGAGAGAATATGGATCGTTGGAAAACTGATCCTTCTCGAGTAGATGTTGAATACAGACAGCAACGTATTTCTACTAACAGAACATCAACTGATAGGCCACCAAAATCTACAGAACCATCATCAAATGGGTTATCAGTAACAGGAGCTACTCATCAAGAGCAAGTTAGGCCTCTTCTTAGCTTGTTGGATAAAGAGCCTCCATCTGGGCGCTTTTCTGGACAGCTTGAGTATGTTCGTCAGTTTTCAGGATTAGAAAGACATGAAAGTGTACTCCCTTTGTTACATACTGAAAAGAAAAATGGCGAACTAGACTTTTTGATGGCAGAATTTGCAGATGTTTCTCAACGTGGAAGGGAAAATGGAAATCTCGACTCTATTGCTAGAGTTTCTCATAAAGTCACTCCCAAGAAATTAGGGACTTTGGGTTCCAGTGAAGGAGCTGCTTCCACATCTGGGATTGCATCGCAGACAGCATCTGGTGTACTGTCTGGTTCAGGTGTTCTAAATGCTAGACCAGGCAGTGCTACTTCGTCTGGGCTACTTTCCCACATGGTTTCATCTCTGAATGCAGAAGTTGCCAGAGAGTATCTGGAGAAAGTGGCAGATCTTCTGCTTGAGTTTGCACAAGCAGACACAACAGTGAAATCTTACATGTGTAGTCAAAGTTTGCTCAGTCGTCTTTTCCAGATGTTTAATAGGGTGGAGCCTCCTATTTTGTTGAAGATACTGAAGTGTATTAATCATCTGTCAACTGATCCAAATTGCTTAGAAAATCTTCAGCGTGCTGAAGCAATAAAATACTTGATACCAAATCTTGAACTCAAAGAAGGGTCTCTTGTATCAGAGATACATCACGAGGTATTGAATGCGCTGTTCAATTTATGCAAAATAAATAAGAGGAGACAAGAACAAGCAGCTGAAAATGGAATCATTCCCCATATGATGCTATTCATCACATCAAATTCTCCCTTGAAACAATATGCTTTGCCTCTGCTGTGTGACATGGCTCATGCATCTCGCAATTCAAGGGAGCAGTTAAGGGCTCATGGTGGTTTGGATGTCTATTTAAACCTTCTTGAGGATGAGCTTTGGTCTGTGACAGCACTAGACTCTATTGCTGTTTGTTTAGCTCACGACAATGATCATAGGAAGGTTGAGCAAGCATTGCTGAAAAAGGATGCAGTTCAGAAGCTTGTGAAGTTCTTCCAGGGCTGTCCAGAGCAGCATTTTGTACACATATTGGAGCCATTCTTGAAAATCATCACAAAATCTGCAAGGATCAATACCACATTGGCTGTTAATGGATTAACACCACTGCTCATTGCAAGGCTAGATCATCAGGATGCTATAGCTCGTCTAAATTTACTCAGGCTAATAAAGGCCGTTTATGAGCATCACCCTCAGCCGAAGAAGTTGATTGTGGAGAATGATTTACCTGAGAAACTTCAAAACTTAATAGGGGAACGGAGAGATGGACAAGTGTTGGTCAAACAGATGGCTACTTCATTACTTAAAGCACTACACATAAACACCGTTTTGTAA 4053 0.4162 MSRQSTTSAFTKSKTLDNKYQEIDLLKNLNHKNIVKYLGSSKTKSHLHIVLEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEASLLGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMAGVCAASDIWSVGCTVIELLTCIPPYYDLQPMPALFRIVQDEHPPIPDSLSPDITDFLLQCFKKDSRQRPDAKTLLSHPWIQNCRRALQSSLRHSGTLRNIEEDDSADAEISHGDQKSAYENSSIEKEDSSKELTTVAADSSIANEDNVSEKADDVPSDQVLTLAIREKSFLQTSSSKLSSSREGVNSESTGNHEISNAKDLHEVMMNGEDGAPQSRGMASKVGGKDSSVNNGNKSFAFGPRGQDNGSLKAMKMPTAVEGTELSRFSDPPGDAYLDDLFHPLDKPPGEVVAEASTSTSTSHMAKGNASTSDGGKNDLAKELRATIARKQWEKESEIGQANNGGNLLHRVMIGVLKDDVIDIDGLVFDEKLPGENLFPLQAVEFSKLVGSLKLEESEDVIVSACQKLIGIFHQRPEQKIVFVTQHGLLPLTDLLEVPKTRVICSVLQLINQIVKDNTDFLENACLVGLIPAVTSFAVPDRPREIRMEAAYFLQQLCQSSSLTLQMFIACRGIPVLVGFLEADYAKYREMVHLAIDGMWQVFKLQQSTPRNDFCRIAAKNGILLRLINTLYSLNESTRLASSSAGGGFSVDGSVQRPRSGILDPTHPYINQNETVLSSVDQQDPPKVRRGVPDHHLEPSSSNPRRSDANYPVDVDRPQSSNAAADVVPLEKSSTQASRESSAGALKERENMDRWKTDPSRVDVEYRQQRISTNRTSTDRPPKSTEPSSNGLSVTGATHQEQVRPLLSLLDKEPPSGRFSGQLEYVRQFSGLERHESVLPLLHTEKKNGELDFLMAEFADVSQRGRENGNLDSIARVSHKVTPKKLGTLGSSEGAASTSGIASQTASGVLSGSGVLNARPGSATSSGLLSHMVSSLNAEVAREYLEKVADLLLEFAQADTTVKSYMCSQSLLSRLFQMFNRVEPPILLKILKCINHLSTDPNCLENLQRAEAIKYLIPNLELKEGSLVSEIHHEVLNALFNLCKINKRRQEQAAENGIIPHMMLFITSNSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLNLLEDELWSVTALDSIAVCLAHDNDHRKVEQALLKKDAVQKLVKFFQGCPEQHFVHILEPFLKIITKSARINTTLAVNGLTPLLIARLDHQDAIARLNLLRLIKAVYEHHPQPKKLIVENDLPEKLQNLIGERRDGQVLVKQMATSLLKALHINTVL 1350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0272 1350 MobiDBLite consensus disorder prediction 765 885 - -
Aed5g0272 1350 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 21 1308 - -
Aed5g0272 1350 CDD STKc_Cdc7_like 21 233 - -
Aed5g0272 1350 Pfam Protein kinase domain 13 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0272 1350 SMART serkin_6 10 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0272 1350 Gene3D - 527 734 IPR011989 -
Aed5g0272 1350 Gene3D - 1010 1159 IPR011989 -
Aed5g0272 1350 PANTHER MAP KINASE KINASE KINASE 21 1308 - -
Aed5g0272 1350 SUPERFAMILY ARM repeat 1017 1343 IPR016024 -
Aed5g0272 1350 MobiDBLite consensus disorder prediction 445 465 - -
Aed5g0272 1350 SUPERFAMILY ARM repeat 536 731 IPR016024 -
Aed5g0272 1350 PRINTS Tyrosine kinase catalytic domain signature 51 64 IPR001245 GO:0004672|GO:0006468
Aed5g0272 1350 PRINTS Tyrosine kinase catalytic domain signature 202 224 IPR001245 GO:0004672|GO:0006468
Aed5g0272 1350 PRINTS Tyrosine kinase catalytic domain signature 89 107 IPR001245 GO:0004672|GO:0006468
Aed5g0272 1350 PRINTS Tyrosine kinase catalytic domain signature 159 181 IPR001245 GO:0004672|GO:0006468
Aed5g0272 1350 MobiDBLite consensus disorder prediction 832 854 - -
Aed5g0272 1350 MobiDBLite consensus disorder prediction 445 467 - -
Aed5g0272 1350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 95 107 IPR008271 GO:0004672|GO:0006468
Aed5g0272 1350 Gene3D - 1160 1345 IPR011989 -
Aed5g0272 1350 MobiDBLite consensus disorder prediction 255 309 - -
Aed5g0272 1350 ProSiteProfiles Protein kinase domain profile. 1 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g0272 1350 MobiDBLite consensus disorder prediction 377 393 - -
Aed5g0272 1350 MobiDBLite consensus disorder prediction 776 791 - -
Aed5g0272 1350 MobiDBLite consensus disorder prediction 255 286 - -
Aed5g0272 1350 MobiDBLite consensus disorder prediction 855 885 - -
Aed5g0272 1350 MobiDBLite consensus disorder prediction 815 831 - -
Aed5g0272 1350 MobiDBLite consensus disorder prediction 325 350 - -
Aed5g0272 1350 MobiDBLite consensus disorder prediction 325 347 - -
Aed5g0272 1350 MobiDBLite consensus disorder prediction 366 401 - -
Aed5g0272 1350 Gene3D Transferase(Phosphotransferase) domain 1 5 273 - -
Aed5g0272 1350 SUPERFAMILY Protein kinase-like (PK-like) 12 234 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0272 Aed-Chr5 1857799 1874299 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0272 1 1350 MAP Kinase Kinase Kinase AT3G13530 68.303 0.0 1860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Aed5g0272 Pkinase 5.1e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0272 - - gmx:100813256 2436.76