Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0249 ATGATGTCACTTTCACCTAGCTTAGGTTCTCCCAACAATCTCTTGTTTAGAGAAATGAAATGCGAGGAAAGGGGTTTGTACTTGATCCATTTGTTGCTCACTTGTGCAAATCATGTAGCTGCTGGTAACCTTGAAAATGCAAACACCACACTCGAGCAAATTTCCCTGCTTGCTTCCCCTGACGGGGACACTATGCAGCGAATTGCGACATATTTTATGGAATCACTCGCTGACCGGATTCTTAAGACATGGCCTGGGATCCACAGAGCCCTCAACTCAACTAGAATGACTCTGCTATCCGAAGAAATTCTGGTTCAGAAGCTTTTCTTTGAGCTTTTCCCTTTCTTGAAGGCAGCATTTGTTCTCACAAATCAGGCCATCATTGAAGCAATGGAAGGGGAGAAAGTGATTCACATAATTGATCTCAATGCTGCTGAAGCTTCTCAGTGGATTGCTCTCCTTCAGGTATTAAGTGCGCGTCCTGAAGGCCCTCCTCATCTGAGAATCACTGGGGTTCATCAGAAAAAGGAGATTCTGGATCAGGTAGCTCATAGACTAACTGAAGAAGCAGAAAAGTTGGATATACCATTCCAATTCAACCCTGTAGTGAGCAAATTAGAAAGTCTTGATTTTGACAAGCTACGTGTGAAAACTGGGGAGGCACTAGCAATAAGTTCCATTCTCCAATTGCATACCCTTTTGGCCTGGGATGATGAAGCCATGCAGAGAAAGTCTCCTCTTCTGTTAAAAAACTCAAATGGAATTCACCTGCAACTGCAAAGAGGCCAAAGCACATTGAGTGATTTCCTTGAGAAAGATGTGGTTAATGGATACACCCCAAGTCCTGACTCAACCTCATCATCACCGGCATCTTTAACTACTAGTCCCAGTACAATGAATATGGAGAGCTTTCTGAATGCCTTGTGGGGATTATCACCAAAGCTCATGGTTGTGACAGAACAAGACTGCAATCATAATGGTCCAACTCTGATGGATAGGCTACTTGAAGCTCTATACTCTTATGCAGCATTGTTTGATTGTTTGGAATCCACTGTCTCAAGAACATCATTGGAGAGATTAAGGGTGGAGAAGATGCTTTTTGGGGAGGAAATAAAGAACATTATTGCATGTGAGGGATCTGAACGAAAGGAGAGACATGAAAAGCTGGACAAGTGGTTTCAGAGATTTGATCTAGCTGGGTTTGGCAACGTGCCTTTGAGCTACTTTGGTATGTTGCAAGCAAGAAGGTTCATGCAGAGCTATGGTTGTGAAGGATACAGAATGAGGGATGAGAATGGTTGTGTTTTAATTTGCTGGGAGGATAGGCCAATGTATTCAATATCAGCTTGGAAATCTAGGAAGTAA 1365 0.4293 MMSLSPSLGSPNNLLFREMKCEERGLYLIHLLLTCANHVAAGNLENANTTLEQISLLASPDGDTMQRIATYFMESLADRILKTWPGIHRALNSTRMTLLSEEILVQKLFFELFPFLKAAFVLTNQAIIEAMEGEKVIHIIDLNAAEASQWIALLQVLSARPEGPPHLRITGVHQKKEILDQVAHRLTEEAEKLDIPFQFNPVVSKLESLDFDKLRVKTGEALAISSILQLHTLLAWDDEAMQRKSPLLLKNSNGIHLQLQRGQSTLSDFLEKDVVNGYTPSPDSTSSSPASLTTSPSTMNMESFLNALWGLSPKLMVVTEQDCNHNGPTLMDRLLEALYSYAALFDCLESTVSRTSLERLRVEKMLFGEEIKNIIACEGSERKERHEKLDKWFQRFDLAGFGNVPLSYFGMLQARRFMQSYGCEGYRMRDENGCVLICWEDRPMYSISAWKSRK 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0249 454 MobiDBLite consensus disorder prediction 277 296 - -
Aed5g0249 454 PANTHER SCARECROW-LIKE PROTEIN 3 1 452 IPR030008 GO:0003700|GO:0005634|GO:0009739
Aed5g0249 454 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 452 IPR005202 -
Aed5g0249 454 MobiDBLite consensus disorder prediction 278 296 - -
Aed5g0249 454 Pfam GRAS domain family 28 451 IPR005202 -
Aed5g0249 454 ProSiteProfiles GRAS family profile. 19 451 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0249 Aed-Chr5 1675256 1678811 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0249 16 454 GRAS Transcription Factor Family AT1G50420 64.798 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed5g0249 GRAS 3.2e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0249 - - gmx:100814131 827.394