Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0204 ATGAGGCTGTTCCACTTGGGCGATGAAGCCATTGATGGTGATATTGGCTTCATACATGAAGATTTAGTACTCAATTTAGTCGATACAATAATATCTACAATAGAATGGACAATGACTGAGCTAATGTGCAATCCAAAGACAATGTTAAAAGTTAAAAGGGAGATTGAGGAAGTTACCATTGGGAAGGGCAAGCCTATTATTGAGGAATCGGACATTGGTAGATTACCATATTTAGAAGCAATAGTGAAAGAGACATTCCGTTTACACCCCTCAGTGCCATTCTTAATTCCTCGAAAAGCTGATATTGATGTACAAGTGAGTGGCTACACCATCCCAAAAGGTTCACAACTCTTGATCAATGTGTGGGCTATTGATAGGGATGCGACGAGTACATGGAAAAACCCAAATGTGTTTTCACCAGAGAGGTTCTTAGGATCAGAGATTGATTTCAAAGATCGACACTTTGAGTTGATACCATTTGGTGCTGGAAGGCGAATGTGTCCTGGCTTGACATATGCCATGAGAGTGGTGTTCTTGATGCTGGCTTCGTTGATTCATGGTTTTGATTGGAAGCTTGAAAATGGCATCAAACCTGAACAGGTTGATAAGGAAGAACAATTTGGAATGGTATTACTAAAGTCTACACCCCTCCGAATTATTCCAATCAATGTAAACCGTGATGTGCATTTTTGTGATCCTTGTGGGAAATGA 711 0.4008 MRLFHLGDEAIDGDIGFIHEDLVLNLVDTIISTIEWTMTELMCNPKTMLKVKREIEEVTIGKGKPIIEESDIGRLPYLEAIVKETFRLHPSVPFLIPRKADIDVQVSGYTIPKGSQLLINVWAIDRDATSTWKNPNVFSPERFLGSEIDFKDRHFELIPFGAGRRMCPGLTYAMRVVFLMLASLIHGFDWKLENGIKPEQVDKEEQFGMVLLKSTPLRIIPINVNRDVHFCDPCGK 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0204 236 Pfam Cytochrome P450 27 218 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0204 236 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 160 169 IPR017972 GO:0005506|GO:0016705
Aed5g0204 236 Gene3D Cytochrome P450 9 226 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0204 236 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 14 223 - -
Aed5g0204 236 PRINTS P450 superfamily signature 25 42 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0204 236 PRINTS P450 superfamily signature 158 167 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0204 236 PRINTS P450 superfamily signature 167 178 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0204 236 PRINTS P450 superfamily signature 80 91 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0204 236 SUPERFAMILY Cytochrome P450 27 221 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0204 236 PRINTS E-class P450 group I signature 34 60 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0204 236 PRINTS E-class P450 group I signature 79 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0204 236 PRINTS E-class P450 group I signature 157 167 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0204 236 PRINTS E-class P450 group I signature 121 145 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0204 236 PRINTS E-class P450 group I signature 167 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0204 Aed-Chr5 1448541 1449251 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0204 21 222 Cytochrome P450 AT1G33720 54.950 1.97e-75 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0204 - K23810 ahf:112735734 274.248