Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0201 ATGCTGCTCATGGGCCATGGCTACGTCGATGACTTGATTCATCAAAATGTGGCAACCATAGATGTCCATGCTGCCAAAGATCTGCTCAATTCATCCGGTTATCATTATCTGGATGTGAGGTCGGTTGAGGAATTCAATAAAAGCCATGTTGAGAATGCTCATAATGTCCCCTATATGTTCATCACTGAAGCGGGACGGGTGAAAAATCCAGATTTTGTTGAGCAGGTGGCAGCAATATGCAAGAATGACGATAAGTTAATCGTGGCTTGCAATAGTGGAGGAAGATCACTCCGAGCCTGCGTTGATCTGCTAGATTCAGGATTTATAAACATTGCTAACATGGGGGGAGGCTACTCTGCGTGGGTGGATGCTGGATTTGCCGGGAACAAACACCTCAAAACTAGTTGCAACTTCCGTCCTAAAGCCCACTGA 432 0.4583 MLLMGHGYVDDLIHQNVATIDVHAAKDLLNSSGYHYLDVRSVEEFNKSHVENAHNVPYMFITEAGRVKNPDFVEQVAAICKNDDKLIVACNSGGRSLRACVDLLDSGFINIANMGGGYSAWVDAGFAGNKHLKTSCNFRPKAH 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0201 143 CDD RHOD 25 122 - -
Aed5g0201 143 PANTHER PROTEIN HIGH ARSENIC CONTENT 1, MITOCHONDRIAL-RELATED 13 137 - -
Aed5g0201 143 PANTHER THIOSULFATE SULFURTRANSFERASE 18 13 137 IPR044684 GO:0003824
Aed5g0201 143 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 15 126 IPR036873 -
Aed5g0201 143 ProSiteProfiles Rhodanese domain profile. 30 130 IPR001763 -
Aed5g0201 143 SMART rhod_4 20 127 IPR001763 -
Aed5g0201 143 Gene3D - 8 127 IPR036873 -
Aed5g0201 143 Pfam Rhodanese-like domain 24 123 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0201 Aed-Chr5 1437784 1438832 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0201 15 129 Sulfurtransferasese or Rhodanese AT5G66170 47.009 2.70e-34 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0201 K22547 - gmx:100794624 233.032