Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0199 ATGGCATACATGTGTGCGGACAGTGGGAACCTGATGGCGATTGCGCAGCAAGTGATCAAGCAGAAGCAGCAACAAGAGCAGCAGCAGCAACAACAACAACAGAACCCTCTCTCCCTTCACCATCCTATTCCAATTCCATGGAACAACACTCCTCCACTCGGCTACCCTATCCCTCCCACCGATTTCCCTGACCCCTTCCAACCCGATCCCTCATTCCACTTCCCCGACCCCCACTCCGCCGCCCCCTTCCGCTTCTCCGACTTCGACTCCGACGATTGGATGGACTCCCTCATCGCCGCCGCCGACACCCCCTCCTGGCACACCAATGCTGATTTCCCCTTCCCCTCCGATCTCAACCGCCTCATCTTCCCCCCTTCCTCCGACACCGCACCAATCCCACTCCAATCCACTCCAGCGCCACCGCACTCCCCCTCCTCAGACTCCGCACACCCGCTCCTGAAAGCCCTAACGGAGTGCGCCACCCTCGCGGAAACGGAACCGGATCAAGCCGCGGATTCCCTAACTCGTTTGCGAAAGTCCGTTTCCCAGCACGGAAACCCCACTCAGCGAGTCGGCTATTACTTCTGTGAAGCCCTCTCCCGCAAAATATGGAAAGAAAAGCTGGAGGCCAATACCAGTACTAGTACTAGTTCGGAGGAGTTAACACTCTCTTACAAAGCTCTGAACGATGCCTGCCCTTACTCCAAGTTCGCTCACTTAACCGCCAACCAAGCCATCCTTGAAGCCACCGAAAACGCCTCCAACATCCACATCGTCGACTTCGGCATCGTCCAAGGGATTCAATGGGCCGCGCTCTTGCAAGCATTCGCCACCCGTTCCTCTGGAAAGCCCAATAAGATCAAAATCTCCGGAATCCCCGCCATGGCCCTTGGGGCCTCCCCCGCCCCATCTCTCTCCGCCACCGGCAACCGTCTCTCCGACTTCGCCAAGCTTCTCGACTTGAATTTCGAGTTCACTCCTATTCTCACTCCCATTCACGAACTCGACCACAACAGCTTTTCCATTGATCCAAACGAGGCCTTGGCTGTTAACTTCATGCTCCAGTTGTATAACCTCTTAGACGAACCTCCTACCGCGGTTGATACTGCGCTCAGGTTGGCCAAGTCTCTCAACCCCAAAATTGTCACTCTTGGGGAGTACGAAGCAAGCTTGACACGTGTCGCCTTTGTCAACCGGTTCAAGGCTGCGTTTAAGTACTTCTCTGCGGTGTTTGAGTCTCTGGAGCCTAATTTGGCCGCGGATTCGCCGGAGAGGTTTCAGGTGGAGAGTCTTCTGCTCGGGCAACGAATTGCGGCGGTTATTGGGCCGGGGCCGGTGAGGGAGACTATGGAGGACAGAGAGCAGTGGAGGGTTCTGATGGAACGTGCTGGTTTTGAATCAGTGAGTCTGAGCAATTATGCAATTAGTCAAGCTAAGATACTTCTGTGGAATTACAGTTACAGTTCTCTATTTTCACTGGTCGAATCTACACCACCGGGGTTTTTGTCTCTGGCTTGGAAGGATGTTCCTCTCTTGACTCTCTCCTCATGGCGTTAA 1557 0.5466 MAYMCADSGNLMAIAQQVIKQKQQQEQQQQQQQQNPLSLHHPIPIPWNNTPPLGYPIPPTDFPDPFQPDPSFHFPDPHSAAPFRFSDFDSDDWMDSLIAAADTPSWHTNADFPFPSDLNRLIFPPSSDTAPIPLQSTPAPPHSPSSDSAHPLLKALTECATLAETEPDQAADSLTRLRKSVSQHGNPTQRVGYYFCEALSRKIWKEKLEANTSTSTSSEELTLSYKALNDACPYSKFAHLTANQAILEATENASNIHIVDFGIVQGIQWAALLQAFATRSSGKPNKIKISGIPAMALGASPAPSLSATGNRLSDFAKLLDLNFEFTPILTPIHELDHNSFSIDPNEALAVNFMLQLYNLLDEPPTAVDTALRLAKSLNPKIVTLGEYEASLTRVAFVNRFKAAFKYFSAVFESLEPNLAADSPERFQVESLLLGQRIAAVIGPGPVRETMEDREQWRVLMERAGFESVSLSNYAISQAKILLWNYSYSSLFSLVESTPPGFLSLAWKDVPLLTLSSWR 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0199 518 MobiDBLite consensus disorder prediction 21 39 - -
Aed5g0199 518 MobiDBLite consensus disorder prediction 21 44 - -
Aed5g0199 518 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 153 517 IPR005202 -
Aed5g0199 518 Coils Coil 12 35 - -
Aed5g0199 518 Pfam GRAS domain family 153 518 IPR005202 -
Aed5g0199 518 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 153 517 - -
Aed5g0199 518 ProSiteProfiles GRAS family profile. 143 518 IPR005202 -
Aed5g0199 518 MobiDBLite consensus disorder prediction 123 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0199 Aed-Chr5 1427534 1429090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0199 1 518 GRAS Transcription Factor Family AT5G66770 57.432 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed5g0199 GRAS 6.4e-105 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0199 - - vra:106779206 791.956