Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0187 ATGGAAGAAGGTAGTGGGTGGGTGGTTTCCATTCTCGTGGTTTTCCTTTTAGTGATCATCTCAAAAATAGTAGAATTGAAGAAGCAGATAAAGCTGCCACCTAGCCCATCAGCTATACCAATCATAGGGCATCTTCATCTGATAAAACCAAAAGAGCCACTGCACCTCACTCTCCATAACCTAACTCAAAAATATGGCCACATATTCTTCCTCCGCCTGGGAACCCGAAACGCCGTCGTTGTCTCATCTCCTTCTTTGGTGGAAGAATGCTTCACAAAGAACGACATCACTTTCGCAAACCGGCCACTAACGCTTGCAGGGAAACATCTAAACTACAACCACAAGGCTATGGGCTTTGCTCCCTACGGCCACCACTGGCGCAGCCTTCGCCGTCTAACCACCCTGGAACTCTTATCCACCAACCGCCTCGCGAAATTCTCCAGAATTCGAGAGGAAGAGGTCACGCTCTTGCTCAACCAAATATTCCAACAATGCACTACTCCATCAACTAAGGTGGAGCTGAGACCCATACTGGTGGAGCTCTCATTCAACATCATGCTTAGGGTCATCACTGGGAAACGCTACTATGGCAAGCATGCGGTTGCGCGAGAGGGGAAGGAGTTCCAGTCTATGATGAAGGAGCTTGCGGAGCTAAATGGAAGTGCGAATTTGAGTGATTTCTTCCCAATTCTGCAGTCGATCGATTTCCAAGGGATACAGAAGAGGATGGTCAAGACCATGAAAAAGGTCGATGGCTTCTTGCAGAAGCTCATTCACGAGCACCGGAGGAATAACACCACCACCACCACCGCTCCTCTCATTGATGTGATGCTTGTTGCTGGGTCAGAAACATCAGCTACTGCAATGGAATGGGCACTGTCACTTCTGTTGAATAATCCAGAAGCAATGCATAAGACAAAGGTCGAGATAGACAGTTACGTGGGGCAAGAGAAAGTGTTAAAAGAACAAGATATAGGAAAACTGAAATACTTGCAAAACGTAATTACAGAGACACTTAGGCTATATCCCGTGGCTCCACTCTTGATACCCCACGAGTCCTCGAAAGATTGTAATGTTGGTGATTATGACATACCAAGAGGGACAATGCTATTTGTGAATCTATGGACCCTGCATAGGGACCCTAAGTGGTGGGTAGATCCAACAAGGTTTGAGCCAGAGAGATTTGATCAAGTTCAGGAATTAGAATTGTACAATATGATTCCATTTGGTACTGGAAGACGAGCTTGCCCTGGAGCTGCTTTGGCAAAACGTGTCATGGGACATGCATTGGGTGCTTTGATTCAGTGTTTTGACTGGGACAGAATTGGGAACCAAGAAATTGACATGACAGAGGCAATAGGGATTACGCTGCCTAAACTTAAACCTTTGGTTGCCTTATGCACACCACGTCAACCTATCATCAAACTTCTCTCAAATATATAA 1443 0.4595 MEEGSGWVVSILVVFLLVIISKIVELKKQIKLPPSPSAIPIIGHLHLIKPKEPLHLTLHNLTQKYGHIFFLRLGTRNAVVVSSPSLVEECFTKNDITFANRPLTLAGKHLNYNHKAMGFAPYGHHWRSLRRLTTLELLSTNRLAKFSRIREEEVTLLLNQIFQQCTTPSTKVELRPILVELSFNIMLRVITGKRYYGKHAVAREGKEFQSMMKELAELNGSANLSDFFPILQSIDFQGIQKRMVKTMKKVDGFLQKLIHEHRRNNTTTTTAPLIDVMLVAGSETSATAMEWALSLLLNNPEAMHKTKVEIDSYVGQEKVLKEQDIGKLKYLQNVITETLRLYPVAPLLIPHESSKDCNVGDYDIPRGTMLFVNLWTLHRDPKWWVDPTRFEPERFDQVQELELYNMIPFGTGRRACPGAALAKRVMGHALGALIQCFDWDRIGNQEIDMTEAIGITLPKLKPLVALCTPRQPIIKLLSNI 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0187 480 Pfam Cytochrome P450 273 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0187 480 Pfam Cytochrome P450 33 278 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0187 480 PANTHER CYTOCHROME P450 82C3-RELATED 272 479 - -
Aed5g0187 480 SUPERFAMILY Cytochrome P450 33 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0187 480 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0187 480 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0187 480 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0187 480 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0187 480 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0187 480 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0187 480 PRINTS E-class P450 group I signature 332 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0187 480 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0187 480 PANTHER CYTOCHROME P450 82C3-RELATED 10 268 - -
Aed5g0187 480 Gene3D Cytochrome P450 25 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0187 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
Aed5g0187 480 PANTHER CYTOCHROME P450 FAMILY PROTEIN 10 268 - -
Aed5g0187 480 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0187 480 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0187 480 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0187 480 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g0187 480 PANTHER CYTOCHROME P450 FAMILY PROTEIN 272 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0187 Aed-Chr5 1342716 1345382 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0187 11 479 Cytochrome P450 AT4G37360 42.570 1.76e-143 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0187 - - gmx:100794610 595.119