Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0177 ATGTTTAAGAGTTCCATCTTGAGTGAGGGTCAAACCTTTCTTTCTTTAGAGATCAACAACAAGATGGAGATAGAAGCAGCAGCAGGAGCAGCAGGCACAGATAGCAACAACAACAACTGGAGCGGTGGTGCTGTTGAGAGAGAGATGTCGACATACACTGGTTTTGACAGAGGAAGCTTCTTGGCTTGGCAAGATCTGAGAGTTGTTATTCCTAACTTTGGAAAGGGACCAACCAAGAGGCTTCTTAATGGACTCAATGGCTATGCTGAGCCTGGTAGAATCATGGCTATCATGGGACCTTCTGGCTCTGGAAAATCAACCCTTCTTGATTCACTTGCAGGTAGACTATCAAAAAATGTGGTTATGACAGGAAATGTTGTTCTGAATGGGAAGAAAAAAGGCATGGGCTACGGTGCTGTGGCATACGTGACTCAAGAAGATGTGTTGATGGGAACACTTACTGTGAAGGAAACGGTAACCTACTCAGCGCATCTACGTCTTCCAACCTCAATGAGCAAAGAAGAAATAGATAGTATAATCGAAGGAACAATAATAGAAATGGGTCTCCAAGACTGTGGTGATAGGTTGATAGGTAACTGGCACTTGAGAGGGATAAGTGGAGGAGAGAAGAAAAGGCTTAGCATTGCACTTGAGATCCTCACAAGGCCTCGCTTACTCTTCCTTGATGAACCTACCAGTGGCCTTGACAGTGCCTCTGCTTTCTTTGTTGTTCAAACTCTTAGAAATGTTGCTCGTGATGGTAGGACTGTTATCTCTTCCATTCACCAGCCCAGCAGTGAAGTCTTTGCACTCTTTGATGACCTCTTCTTACTCTCTGGCGGCGAAACTGTTTATTTTGGAGAAGCAAAATCAGCAATTGAGTTTTTCGCTGAAGCTGGTTTCCCTTGTCCACGTAAAAGAAACCCTTCTGATCACTTCCTACGATGTATCAATTCTGATTTCGACATTGTAACAGCTACACTCAAGGGATCTCAGAGAATTCATGATGTTCCAAATTCAGCAGATCCTTTCATGAATTTGGCTACAGCAGAGATAAAGGCAATGCTGGTTGAGAAATATAGGCGTTCAGCATATGCGAGAAGGGCAAAGAACAGAATTCAAGAACTATCTACCGATGAAGGGCTTCAACCTCCGACGCAACATGGAAGTCAAGCTAGTTGGTGGAAGCAACTTTTGACGTTGACACAGAGATCATTTGTGAACATGTGTAGAGATGTGGGTTACTACTGGCTCAGGATCATAATTTACATCATCGTATCCATATGTGTGGGAACCGTTTACTTTGATGTTGGCTATAGCTACACTTCCATTCTGGCCCGTGGTGCCTGCGGTGCATTTATATCAGGATTCATGACATTCATGTCAATTGGGGGCTTTCCATCATTTATTGAAGAAATGAAGGTATTTTATCGAGAAAGGCTGAATGGATACTATGGAGTTGCAGCATATATTATAGCCAACTTCCTTTCTTCTTTCCCATTCTTGGTTGCTATTGCTCTTACAAGTAGCACCATAACGTATAACATGGTGAAATTCAGGCCAGGAATCAGTCACTTTGTGTTTTTCTTTCTCAACATCTACAGCTGCATCTCCGTAATAGAGAGCCTCATGATGGTTGTAGCTTCACTTGTTCCTAATTTCCTCATGGGAATTATTACAGGGGCTGGAATAATAGGAATCATGATGATGACCTCCGGATTCTTTAGGTTGCTCTCTGATCTTCCAAAGCCGGTTTGGCGCTACCCAATTTCATATATCAGTTATGGTTCTTGGGCAATACAGGGTTCCTACAAGAATGACTTGCTTGGGCTTGAGTTTGATCCTCTGATACCTGGTGACCCAAAATTGACTGGAGAATACGTGATCACACACATGTTAGGCATTGAATTAAGCCATTCGAAGTGGTGGGACTTAGCAGCTCTATTTGTGATTCTCATATGTTACAGACTTCTGTTCTTTATTGTTCTAAAGTTCAAGGAGAGAGCATCCCCATTGTTTCAGACACTTTATGCCAAGCGAACCATCCAACAGCTTGAAAAAAGACCCTCTTTTAGGAAGATGCCATCATTCCCTTCACAGAGGCATCAACCCCTCCATTCACTTTCTTCTCAAGATGGTCTTGATTCTCCACTCCAGTACTAA 2163 0.4286 MFKSSILSEGQTFLSLEINNKMEIEAAAGAAGTDSNNNNWSGGAVEREMSTYTGFDRGSFLAWQDLRVVIPNFGKGPTKRLLNGLNGYAEPGRIMAIMGPSGSGKSTLLDSLAGRLSKNVVMTGNVVLNGKKKGMGYGAVAYVTQEDVLMGTLTVKETVTYSAHLRLPTSMSKEEIDSIIEGTIIEMGLQDCGDRLIGNWHLRGISGGEKKRLSIALEILTRPRLLFLDEPTSGLDSASAFFVVQTLRNVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKSAIEFFAEAGFPCPRKRNPSDHFLRCINSDFDIVTATLKGSQRIHDVPNSADPFMNLATAEIKAMLVEKYRRSAYARRAKNRIQELSTDEGLQPPTQHGSQASWWKQLLTLTQRSFVNMCRDVGYYWLRIIIYIIVSICVGTVYFDVGYSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERLNGYYGVAAYIIANFLSSFPFLVAIALTSSTITYNMVKFRPGISHFVFFFLNIYSCISVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGSWAIQGSYKNDLLGLEFDPLIPGDPKLTGEYVITHMLGIELSHSKWWDLAALFVILICYRLLFFIVLKFKERASPLFQTLYAKRTIQQLEKRPSFRKMPSFPSQRHQPLHSLSSQDGLDSPLQY 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0177 720 MobiDBLite consensus disorder prediction 687 720 - -
Aed5g0177 720 Gene3D - 56 300 IPR027417 -
Aed5g0177 720 Pfam ABC-2 type transporter 262 318 IPR043926 GO:0140359
Aed5g0177 720 MobiDBLite consensus disorder prediction 696 720 - -
Aed5g0177 720 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 297 IPR027417 -
Aed5g0177 720 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 58 714 - -
Aed5g0177 720 Pfam ABC-2 type transporter 397 606 IPR013525 GO:0016020|GO:0140359
Aed5g0177 720 ProSitePatterns ABC transporters family signature. 205 219 IPR017871 GO:0005524
Aed5g0177 720 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 58 714 - -
Aed5g0177 720 Pfam ABC transporter 82 233 IPR003439 GO:0005524
Aed5g0177 720 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 61 305 IPR003439 GO:0005524
Aed5g0177 720 SMART AAA_5 91 262 IPR003593 -
Aed5g0177 720 CDD ABCG_EPDR 58 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0177 Aed-Chr5 1268270 1273091 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0177 77 274 Calmodulin-binding Proteins AT2G36910 30.275 3.29e-11 65.1