Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0175 ATGTTTTTGGCGAGACCCATTTTCCGGGGACCCTCCCTTTGGGTGTTGCACTCTTCATACGCATATTCATCTGCCTCAGCAGCTGCAATTCAAGCTGAGAGAGGCATCAAAGAAGGACCCAGAAACGATTGGAGCCGAGACGAAGTCAAATCCATCTACGACTCTCCCGTTCTCGATCTTCTCTTCCATGGGGCTCAAGTTCACAGACATGCTCATAACTTCAGGGAAGTTCAGCAGTGTACTCTTCTGTCTATCAAAACAGGAGGATGCAGTGAAGATTGTTCCTATTGTCCTCAATCCTCTAAGTATGACACAGGAATCAAAGGCCAACGGCTTATGAACAAGGAAGCTGTTCTCCAGGCTGCAAAGAAGGCAAAAGAGGCTGGGAGTACTCGCTTTTGTATGGGTGCCGCGTGGAGGGATACGCTAGGAAGAAAGACCAACTTCAACCAGATCCTTGAATATGTGCAAGACATAAGGGGCATGGGGATGGAGGTTTGTTGCACCCTTGGCATGCTGGAGAAACAGCAGGCTGTTGAACTAAAAAAGGCAGGTCTCACTGCCTATAATCACAATCTTGACACTTCAAGGGAGTATTATCCAAACATCATCACAACAAGGACTTATGATGAGCGAGGAATTATAGGGCTTGGAGAAGCAGAGGAGGATCGTGTAGGTTTGTTACATACATTGTCAACACTCCCCACCCATCCAGAGAGTGTTCCTATTAATGCACTTCTTGCTGTAAAGGGAACCCCTCTTGAGGATCAGAAGCCTGTTGAAATATGGGAGATGATTCGCATGATAGCCACTGCACGTATCATAATGCCAAAAGCAATGGTCAGGTTATCAGCTGGCAGAGTTCGATTCTCCATGCCTGAGCAGGCATTGTGCTTTCTTGCTGGTGCAAATTCTATATTCACTGGGGAAAAGCTTCTCACTACTCCTAACAATGATTTTGATGCTGATCAACTCATGTTTAAAGTACTTGGACTTCTCCCCAAAGCTCCAAGCTTACATGAAGGTGAAACTAGTGTCACAGAAGATTATAAGGAAGCAGTTTCTTCTAGTTGA 1074 0.4572 MFLARPIFRGPSLWVLHSSYAYSSASAAAIQAERGIKEGPRNDWSRDEVKSIYDSPVLDLLFHGAQVHRHAHNFREVQQCTLLSIKTGGCSEDCSYCPQSSKYDTGIKGQRLMNKEAVLQAAKKAKEAGSTRFCMGAAWRDTLGRKTNFNQILEYVQDIRGMGMEVCCTLGMLEKQQAVELKKAGLTAYNHNLDTSREYYPNIITTRTYDERGIIGLGEAEEDRVGLLHTLSTLPTHPESVPINALLAVKGTPLEDQKPVEIWEMIRMIATARIIMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKVLGLLPKAPSLHEGETSVTEDYKEAVSSS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0175 357 PANTHER BIOTIN SYNTHASE 19 350 IPR002684 GO:0004076|GO:0009102
Aed5g0175 357 SUPERFAMILY Radical SAM enzymes 42 334 - -
Aed5g0175 357 SMART MiaB 80 271 IPR006638 GO:0003824|GO:0051536
Aed5g0175 357 Pfam Radical SAM superfamily 87 210 IPR007197 GO:0003824|GO:0051536
Aed5g0175 357 Hamap Biotin synthase [bioB]. 42 335 IPR002684 GO:0004076|GO:0009102
Aed5g0175 357 PIRSF Biotin_synth 213 341 IPR024177 -
Aed5g0175 357 PIRSF Biotin_synth 25 212 IPR024177 -
Aed5g0175 357 SFLD Radical SAM 42 212 IPR007197 GO:0003824|GO:0051536
Aed5g0175 357 SMART BATS_2 242 334 IPR010722 -
Aed5g0175 357 Pfam Biotin and Thiamin Synthesis associated domain 242 332 IPR010722 -
Aed5g0175 357 Gene3D Aldolase class I 213 336 IPR013785 -
Aed5g0175 357 Gene3D Aldolase class I 41 212 IPR013785 -
Aed5g0175 357 SFLD biotin synthase like 42 212 - -
Aed5g0175 357 ProSiteProfiles Radical SAM core domain profile. 75 287 IPR007197 GO:0003824|GO:0051536
Aed5g0175 357 CDD Radical_SAM 87 270 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0175 K01012 - gmx:100808225 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1161 1 11326781 11331395 Aed5g0175 5 1258962 1261902 PCT