Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0165 ATGGAAAACGCCAGTGACGATAATAGGTTTTCGAATCCAAACGCAAACGCAAAAGCGACGACCTCTTCCTCAAGTTTCACGTTCAGTACCCCTTCCGCTTCGGGCCTGTCCCGGCCCAGATTCGTGAAGGTTCGCAAGCCCAACAACGCCCCCGCCTTCAATTCATTTCGCAACGGTGCTGCTGCCAATGCCGCATCCGCCACCACCGATTTGGCTTCAGGAGTCGGCGATCGATTCAGGAATCTCAAAATCGGTGAGGGCTTCGACGCCACACACCACCACGGTGAGTTCGCGTTTGCCACTAAATCTTCTTCACGTGTTGATGAAAACTCGGTCTCTGAACAGATCAACAAGCTGAAGATTGTAGCCGATAACAACGAATCGGACCTACAGAATGAGCTGAAGAAGAAATTGAACATTAGTAATACTGCAGTTGCTGATAACCCAGCGAACGAAGTTATATTTCAATTGAAGAATCTGAATGTGAATGACTCTATTGGTCGTAATGTCGAGAGTGAAACGGAGGCGGATTTGTTGAAGAAATTGGAGAAGTTAAACCTAGTTAAGGAGGAATGTGCTGAACGGAATTTGTGCAATCCTTTTGTGGAGGGAATTCGCCGAAGAGATGCAAGTGGTGCTGGTGCTCAAGTTGCTGTGGGAGACATTGGAATGTCACAAAGTGCTGCATCAGCTTCGACTTCTATGTTTTTTCAGCCTGTTGGAGTTGGCAAGAGGGAGGAATTTGTGTTTACTGGTAATCAAGATAGTTCAGGCTCATCTTTTGCTGAGTTTAAAACACCTGCACCGAAAATTGGCAAAGAAGGGAAACTTAAGGAAAAAGGGAGTAAAGTGAAAATGAATAAAGGTAGAGAAAAACTGAAGTATTATGGCTCGGCCCAGCCGTGGCATGGCCAGGGTTTTGTTTTGAAAGAAAGTGTTCCCCAGGATGAACCACAGGGTTCTGCAGAGAGTTGTTCACCAATGGACGTGTCACCGTATCAGGAAAAACTGGCTGAAAATGAAAGGCAGAGGGAAAGTTCTTTGACATCCAACGAGTCATTTAGTGTTGATAACAACAATATAGTTAATGATTCAGAACCAACAACTTCAATTGATCCCATTGATGAAGATCTAATTGCCGCGGCAGAGAGCTTGAATATAAATGGGGGTGATGCTGCACACAGAAACACTAAGGAAGAAAGTCCAGAGTATCAAGTACGAGAAAATAGTTGTGTTGAAGACCTGAAGGATGAGTCAATTTCTGGGGTTGAAACTGAAAGCTTTAAGTCTGCCAATGATGAAGTGGACATAACTAGTGATGCGGCCAGTGTATCAGCAGAAACTGAAGCCCATGATAGTGATAGAATGTTGCACCTTGGTAGTGCTTTGAGTTCAACAAATGTAACTGGGTCTGCCTTCACATTTGCTGCTGCTTCTTCGGCTGAAGCTCAATTAAATAGCCCAAAACGCCATCCCAAAAAGAAAAATGTTGCTCTCGATTCTTACAACTACACACCAAACATAAAGGTTCCTTATTCATCATCGTCTGTGGCATTTTCTCCATTTTCTGGAACTTCATCTCTTTTGACATCAGGGCAAAGTTTAAAACCCAAGCTATCCTCTACTCAGCCCAAAACAAGTGATTCTGATGTGACTGAGGAGGAAGCCTGTGAAAAGTGGAGGCTCCGAGGAAACCAAGCCTATAAAAAGGGGGATCTGTCTACGGCTGAGAATTGTTACAAACAAGGACTTATTTGTGTATCTAAAGAAGCATCTCGTAGCTCTCTCAGGGCTTTGCTGCTATGTTATAGCAACCTTGCTGCCACACACATGTCTCTTGGTAGGATGAGAGATGCACTAGAAGATTGTAAGATGGCTTCTGAAATAGATCAAAATTTTCTCAAGGTGCAACTTAGAGCTGCAAATTGTTACCTTGCTCTGGGGGAAGTTGAAGATGCATCACAATATTTTAAAAGGTGCTTGCAATCAGGAACAGATGTTTGTGTGGATCGAAAAATTGCTGTGGAAGCCTCTGATGGCTTAGAAAAGGCACAGAAAGTATCAGATGTCATCAATCATTCTGCTCAGCTTCTGCAAAGAAGAACATCCTCTGATGCAGAGAGAGCATTAGAATATATTAATGAGGCTTTGACGATAAGTTCATACTCTGAAAAATTGCTTGAAATGAAAGTAGAGGCTCTGCTAATGCTTTGTAGATATGAGGAGGTGATTGAGCTGTGTGACAAAACCCTTGATTCTGCTGAAAAGAATGCCTGTCCATTGGATGCTGGTTGCCAGGTCACAGATCTGGATAATTCACAACTCTCAAAACGTTTCTACTTCAGAATATGGCGATGCTCAGTGATGCTTAAATCCTACTTTCACCTAGGAAAATTTGAAGAGGGTCTTTCTTTGCTGGAGCAACAAGAGGAAAAGGTGTCTGCCATAAACAAGAGTGCAAGCAAGGTTTTGGATTCACTCATACCTCTAGCTGCCATTATACGTGTGCCCTTGCATCATAAGACTGCAGGGAATGCAGCATTTCAGGCTGGAAGGCATGCAGAAGCTGTTGAACACTATACATCTGCTTTGTCATGTAATGTGGAGTCTCGTCCATTTGCAGCTGTCTGTTATTGTAACCGTGCTGCTGCATATAAAGCTTTAGGTCAAATAACTGACGCTATTGCAGATTGCAGTCTAGCTATAGCTCTTGATGGAAATTATTTGAAGGCACTCTCTAGACGTGCAACTCTGTATGAGATGATTAGAGATTATGCCCAAGCAGCCAGTGACCTTAAGAGGCTTGTCTCTCTTCTCAGTAAGGGGGTGGAGGACCATGCTAATCAGCTTGGAATATCTGATAAGTCAATTAATTATACTATTGATTTGAAACAAAATCGTGTTCGTCTTTTGGAAATGGAAGAGGAAGATAGAAAGGAGATCCCTCTTGATATGTACCTCATTTTAGGAGTTGAACCATCTGCTTCGAAATCTGAAATCAAGAAGGCCTATCGGAAAGCTGCACTTAGACACCACCCTGACAAGGCTGGGCAGTCTTTGATCAAAAGTGATAATGGAGATGACCAGATATGGAAGGTTATTGCTGAAGAAGTACACACAGATGCTGATCGGCTTTTCAAAATAATTGGGGAGGCATATGCTGTGCTGTCAGACCCTTCCAAGAGGGCACGTTATGATGCAGAAGAAGAAATGAGGAATTCCCAAAAGAGACGGCATGGGCCTATAGGTAAAAATAATGTGGATGCCCAGTATTACCACCCATTTGAACAAAGCAACAGGAGACAGTGGAGAGATGTTTATAGATCATATGGTAATTCATCTTTTCGAGGTTCTGAACCTGCTGCTGCAAGATCAACCAGGAAATAA 3387 0.4311 MENASDDNRFSNPNANAKATTSSSSFTFSTPSASGLSRPRFVKVRKPNNAPAFNSFRNGAAANAASATTDLASGVGDRFRNLKIGEGFDATHHHGEFAFATKSSSRVDENSVSEQINKLKIVADNNESDLQNELKKKLNISNTAVADNPANEVIFQLKNLNVNDSIGRNVESETEADLLKKLEKLNLVKEECAERNLCNPFVEGIRRRDASGAGAQVAVGDIGMSQSAASASTSMFFQPVGVGKREEFVFTGNQDSSGSSFAEFKTPAPKIGKEGKLKEKGSKVKMNKGREKLKYYGSAQPWHGQGFVLKESVPQDEPQGSAESCSPMDVSPYQEKLAENERQRESSLTSNESFSVDNNNIVNDSEPTTSIDPIDEDLIAAAESLNINGGDAAHRNTKEESPEYQVRENSCVEDLKDESISGVETESFKSANDEVDITSDAASVSAETEAHDSDRMLHLGSALSSTNVTGSAFTFAAASSAEAQLNSPKRHPKKKNVALDSYNYTPNIKVPYSSSSVAFSPFSGTSSLLTSGQSLKPKLSSTQPKTSDSDVTEEEACEKWRLRGNQAYKKGDLSTAENCYKQGLICVSKEASRSSLRALLLCYSNLAATHMSLGRMRDALEDCKMASEIDQNFLKVQLRAANCYLALGEVEDASQYFKRCLQSGTDVCVDRKIAVEASDGLEKAQKVSDVINHSAQLLQRRTSSDAERALEYINEALTISSYSEKLLEMKVEALLMLCRYEEVIELCDKTLDSAEKNACPLDAGCQVTDLDNSQLSKRFYFRIWRCSVMLKSYFHLGKFEEGLSLLEQQEEKVSAINKSASKVLDSLIPLAAIIRVPLHHKTAGNAAFQAGRHAEAVEHYTSALSCNVESRPFAAVCYCNRAAAYKALGQITDAIADCSLAIALDGNYLKALSRRATLYEMIRDYAQAASDLKRLVSLLSKGVEDHANQLGISDKSINYTIDLKQNRVRLLEMEEEDRKEIPLDMYLILGVEPSASKSEIKKAYRKAALRHHPDKAGQSLIKSDNGDDQIWKVIAEEVHTDADRLFKIIGEAYAVLSDPSKRARYDAEEEMRNSQKRRHGPIGKNNVDAQYYHPFEQSNRRQWRDVYRSYGNSSFRGSEPAAARSTRK 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0165 1128 SUPERFAMILY Chaperone J-domain 958 1065 IPR036869 -
Aed5g0165 1128 MobiDBLite consensus disorder prediction 347 369 - -
Aed5g0165 1128 Gene3D Tetratricopeptide repeat domain 556 828 IPR011990 GO:0005515
Aed5g0165 1128 SMART dnaj_3 983 1061 IPR001623 -
Aed5g0165 1128 CDD DnaJ 984 1058 IPR001623 -
Aed5g0165 1128 MobiDBLite consensus disorder prediction 1 42 - -
Aed5g0165 1128 MobiDBLite consensus disorder prediction 532 547 - -
Aed5g0165 1128 MobiDBLite consensus disorder prediction 532 552 - -
Aed5g0165 1128 Gene3D Tetratricopeptide repeat domain 838 953 IPR011990 GO:0005515
Aed5g0165 1128 Gene3D DnaJ domain 971 1087 IPR036869 -
Aed5g0165 1128 PRINTS DnaJ domain signature 1103 1122 IPR001623 -
Aed5g0165 1128 PRINTS DnaJ domain signature 986 1004 IPR001623 -
Aed5g0165 1128 PRINTS DnaJ domain signature 1004 1019 IPR001623 -
Aed5g0165 1128 PRINTS DnaJ domain signature 1041 1061 IPR001623 -
Aed5g0165 1128 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 13 1122 - -
Aed5g0165 1128 MobiDBLite consensus disorder prediction 1066 1096 - -
Aed5g0165 1128 MobiDBLite consensus disorder prediction 1 36 - -
Aed5g0165 1128 Pfam DnaJ domain 984 1066 IPR001623 -
Aed5g0165 1128 MobiDBLite consensus disorder prediction 1066 1083 - -
Aed5g0165 1128 SUPERFAMILY TPR-like 837 938 IPR011990 GO:0005515
Aed5g0165 1128 MobiDBLite consensus disorder prediction 312 372 - -
Aed5g0165 1128 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 13 1122 - -
Aed5g0165 1128 SMART tpr_5 909 942 IPR019734 GO:0005515
Aed5g0165 1128 SMART tpr_5 557 590 IPR019734 GO:0005515
Aed5g0165 1128 SMART tpr_5 724 757 IPR019734 GO:0005515
Aed5g0165 1128 SMART tpr_5 634 667 IPR019734 GO:0005515
Aed5g0165 1128 SMART tpr_5 837 870 IPR019734 GO:0005515
Aed5g0165 1128 SMART tpr_5 600 633 IPR019734 GO:0005515
Aed5g0165 1128 SMART tpr_5 875 908 IPR019734 GO:0005515
Aed5g0165 1128 Coils Coil 1123 1128 - -
Aed5g0165 1128 SUPERFAMILY TPR-like 559 937 IPR011990 GO:0005515
Aed5g0165 1128 ProSitePatterns Nt-dnaJ domain signature. 1046 1065 IPR018253 -
Aed5g0165 1128 ProSiteProfiles dnaJ domain profile. 984 1069 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0165 Aed-Chr5 1199199 1209785 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0165 986 1067 C2H2 Transcription Factor Family AT1G74250 36.585 4.64e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0165 K09527 - gmx:100790770 1719.52