Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0157 ATGAGACCCGGTGAGTTCCTTGATGAAAACGCATCCTCGAAGCTCAGGTTTGGGTTCGGAGCGAGGTTTGGTTTGGACTTTGAAGAGTACAGTAATAAGCACTTGGCACTTAGCTTAGCTCCATCACCCGCCACTACAAAAGAAGAAGAAGAAGAAGAGGATCACCATAGGAGAACATCAATTCAATTATATATGGGAGGTTTCAATGGAGAAGAAGGTGGTGTTGTGAGAGGAAAGGAAGAAGAAAACAAGTGGCCTTCATGGCTGCAGCCACTTCTCAAGACAAGTTTCTTTGTTCAATGCAAAGTCCACGGAGATTCTCACAAGAGTGAATGCAATATGTATTGCTTGGACTGTGTCAATGGTGCCCTTTGTTCTGCATGTCTTGCTTCCCACAAAGAACACAGAACAATCCAGATAAGGAGGTCTTCATACCATGATGTGATAAGGGTGTCTGAGATACAGAAATTTATGGACATAACAGGGGTCCAAACTTACATTATTAATAGTGCCAAGATTGTGTTCTTAAATGAAAGGCCACAACCTAGGCCTGGAAAAGGGGTCACCAATACCTGCCATGTCTGTGAGCGCAGCCTCCTTGATTCCTTCAGCTTCTGTTCTCTTGGTTGTAAGATTGTTGGAACCTCCAAAAAGTCCCGGAAGAAGAAAATGTTAGGTGAGGCAGATGATGGGTCTGATGGTGAAGAATCGGTGAATGGCATAAGCAATGCAAGTGGCAGAAACAAAATCCATAATAGCTTTACACCCTCAACACCACCACCAACAGTGGTTAATTACAGAACTGCCAAGAGAAGAAAAGGAATTCCACATAGATCTCCAATGGGTGGAGGGCTTATTATAGAATACTAA 870 0.4333 MRPGEFLDENASSKLRFGFGARFGLDFEEYSNKHLALSLAPSPATTKEEEEEEDHHRRTSIQLYMGGFNGEEGGVVRGKEEENKWPSWLQPLLKTSFFVQCKVHGDSHKSECNMYCLDCVNGALCSACLASHKEHRTIQIRRSSYHDVIRVSEIQKFMDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCHVCERSLLDSFSFCSLGCKIVGTSKKSRKKKMLGEADDGSDGEESVNGISNASGRNKIHNSFTPSTPPPTVVNYRTAKRRKGIPHRSPMGGGLIIEY 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0157 289 Pfam PLATZ transcription factor 141 212 IPR006734 -
Aed5g0157 289 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 70 284 - -
Aed5g0157 289 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 70 284 - -
Aed5g0157 289 MobiDBLite consensus disorder prediction 39 58 - -
Aed5g0157 289 MobiDBLite consensus disorder prediction 236 264 - -
Aed5g0157 289 MobiDBLite consensus disorder prediction 221 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0157 Aed-Chr5 1148446 1150917 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Aed5g0157 PLATZ 4.8e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0157 - - gmx:100810757 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0157 5 1148446 1150917 Aed11g1863 11 21702973 21704503 ECH
Aed5g0157 5 1148446 1150917 Aed5g0157 5 1148446 1150917 ECH