Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0151 ATGCAAAAGAAGCTGCGCATGTCGACCCCATTTTCGCAGCACATGGCTGCCGCTGATAACACCAACCCAAAGGATTATTACAAAGTGCTGGAGGTTGAATATGATGCAACTGATGAAAATATCAAATTAAATTACCGAAGACTCGCACTGAAATGGCATCCTGACAAGCATGGAGGTGACAGTGCTGTTACTGCAAAATTTCAAGAGATAAATGAAGCTTACAATGTATTAAGTGATCCTGCCAAGCGTTTTGACTATGATTTAACTGGGATATGTGAGATTGAGAAATATAGCTTGCAGGAATATCTTGCCAGATTTAAAGGCATGATTCTTACCTGCAATGGACTTGGTATCAATCAAACAGACAGATGGTCACAACAATTGATTGAAAAGTTTGAATCCCTAGATAAATAA 414 0.3889 MQKKLRMSTPFSQHMAAADNTNPKDYYKVLEVEYDATDENIKLNYRRLALKWHPDKHGGDSAVTAKFQEINEAYNVLSDPAKRFDYDLTGICEIEKYSLQEYLARFKGMILTCNGLGINQTDRWSQQLIEKFESLDK 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0151 137 Pfam DnaJ domain 25 87 IPR001623 -
Aed5g0151 137 PRINTS DnaJ domain signature 27 45 IPR001623 -
Aed5g0151 137 PRINTS DnaJ domain signature 45 60 IPR001623 -
Aed5g0151 137 PRINTS DnaJ domain signature 62 82 IPR001623 -
Aed5g0151 137 SMART dnaj_3 24 82 IPR001623 -
Aed5g0151 137 SUPERFAMILY Chaperone J-domain 22 110 IPR036869 -
Aed5g0151 137 ProSiteProfiles dnaJ domain profile. 25 90 IPR001623 -
Aed5g0151 137 Gene3D DnaJ domain 8 103 IPR036869 -
Aed5g0151 137 CDD DnaJ 25 79 IPR001623 -
Aed5g0151 137 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 15 129 - -
Aed5g0151 137 PANTHER DNAJ PROTEIN-LIKE 15 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0151 Aed-Chr5 1118687 1123585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0151 15 87 C2H2 Transcription Factor Family AT1G74250 41.026 1.59e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0151 - - gmx:100305987 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0151 5 1118687 1123585 Aed5g0151 5 1118687 1123585 ECH