Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0150 ATGACTAAAACCTTGGGAGAGATTATTACATGCAAAGCTGCGATATGCTGGGGAATAGGAAAGGCTTTGACGGTGGAAGAAATAGAAGTAGAGCCACCCAAAGCCACCGAAGTTCGAGTTAAGATGCTTTGTGCCAGTATCTGCTCCACCGACATCTCAAGCACTAAAGGATTCCCACATACCAATTTTCCTATAGCACTTGGACACGAAGGAGTTGGTGTTATAGAGAGTGTTGGTGATCAAGTGACGCATCTGAAAGAAGGGGATGTGGTAATTCCAACATACATAGGCGAGTGTAAAGAATGTGAGAATTGTGTGTCAGAAAAAACAAATTTGTGTATGACATACCCAGTAAGATGGACGGGTCTAATGCCAGATAACACTTCGAGGATGTCAATCAGAGGAGAGAGGCTATACCATGTCTTAAGCTGTGCCACGTGGTCAGAGTACATGGTTAGTGATGCCAACTACGTTCTCAAACTTGATCCAACCATTGATCCAGCCCATGCCAGTTTCATCTCATGTGGCTTTTCAACTGGATTTGGAGCTGCTTGGAAAGAAGCCAAGGTTCAAACTGGATCCACTGTAGTTGTTTTTGGTCTTGGGGCTGTTGGATTAGGGGCTGTAATTGGAGCCAAAATGCAGGGAGCAAGTAGGATAATTGGAATTGACACAAATGAGAACAAGAGAAAAAAGGGAGAAGCTTTCGGCATAACTGACTTTATAAATCCGAGTGATTCTCATAAATCTGCTTCAGAATTGGTAAAGGAACTAAGTGGTGGAATGGGTGTGGACTATGCCTTTGAGTGTACTGGAGTTTCCACTTTACTCTCTGAATCCTTGGAAGCTACTAAAGTGGGAACAGGTAAAGCAATAGTAATTGGTGTAGGAACTGAACTAACTTTGCCATTGGGTCTTTTTTTCCATTCTGCTGGAACTCTGAAAGGTTCTGTTTTTGGAGGCCTCAAAGCCATATCAGACCTTTCCATCGTAGCTGACAAAGGCCACAAAAAGGAATTTCCTCTTGAAGAACTCTTCACCCATGAGGTCACATTGACAGAGATAAACAGAGCATTTGAGCTAGTGAAACAGCCTAATTGTGCGAAAGTTGTCATCAACATGTGA 1125 0.4293 MTKTLGEIITCKAAICWGIGKALTVEEIEVEPPKATEVRVKMLCASICSTDISSTKGFPHTNFPIALGHEGVGVIESVGDQVTHLKEGDVVIPTYIGECKECENCVSEKTNLCMTYPVRWTGLMPDNTSRMSIRGERLYHVLSCATWSEYMVSDANYVLKLDPTIDPAHASFISCGFSTGFGAAWKEAKVQTGSTVVVFGLGAVGLGAVIGAKMQGASRIIGIDTNENKRKKGEAFGITDFINPSDSHKSASELVKELSGGMGVDYAFECTGVSTLLSESLEATKVGTGKAIVIGVGTELTLPLGLFFHSAGTLKGSVFGGLKAISDLSIVADKGHKKEFPLEELFTHEVTLTEINRAFELVKQPNCAKVVINM 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0150 374 Gene3D - 180 317 - -
Aed5g0150 374 Pfam Alcohol dehydrogenase GroES-like domain 36 160 IPR013154 -
Aed5g0150 374 PANTHER ALCOHOL DEHYDROGENASE 7 373 - -
Aed5g0150 374 SUPERFAMILY GroES-like 4 192 IPR011032 -
Aed5g0150 374 Gene3D - 15 369 - -
Aed5g0150 374 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Aed5g0150 374 Pfam Zinc-binding dehydrogenase 203 321 IPR013149 -
Aed5g0150 374 CDD liver_alcohol_DH_like 9 372 - -
Aed5g0150 374 SMART PKS_ER_names_mod 18 372 IPR020843 GO:0016491
Aed5g0150 374 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 335 IPR036291 -
Aed5g0150 374 PANTHER ALCOHOL DEHYDROGENASE-RELATED 7 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0150 Aed-Chr5 1113942 1115909 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0150 36 328 Monolignol Biosynthesis Gene Families AT2G21730 26.316 1.50e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0150 K00121 - gmx:100500200 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0150 5 1113942 1115909 Aed5g0150 5 1113942 1115909 ECH