Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0149 ATGCCAAATACCTCGCAGGTTATTACATGCAAAGCTGCAATATGCTGGGGGGCAGGGAAGGCTGTGACGGTGGAAGAGATACAAATAGACCCACCAAAAGCAACAGAAGTTCGAGTTAAGATGCTATGTGCAAGTTTATGCCACACTGACATCTCAAGCATTCAAGGATTCCCTTATATCAATTATCCTCTAGCACTTGGACACGAAGGAGTTGGTGTTGTAGAGAGTGTTGGTGATGAAGTGAGCAATCTGAAAGAAGGGGATATAGTAATTCCAACATACATAGGCGAGTGTGAAGAATGTGAGAACTGTGTTTCAGGAAAAACCAATTTGTGTCTGAAATACCCTATAAGATTGACTGGTCTGATGCCAGATAACACTTCAAGGTTGTCAATCAGAGGAGAGAGGCTACACCATGTTCTAAGCTGTGCAACATGGTCAGAGTACATGGTTAGTGATGTCAACTACACTCTCAAAGTTGATCCAACCATTGATCCAGCTCATGCCAGTTTCATCTCATGTGGCTTTTCAACTGGTTATGGAGCTGCTTGGAAGGAAGCCAAGGTTGAAAGTGGTTCCACTGTAGCGGTTTTTGGTCTTGGAGCTGTTGGATTAGGGGCTATAAGTGGAGCCAAAATGCTGGGAGCAACTAAGATAATTGGAATTGACAAAAATGAGATGAAGAGAGAAAAAGGAGAGGCTTTTGGAATGACTCACTTTATAAATCCTGATGACGATTCTGCTAAATCTGTTTCAGAATTGGTTAAGGAACTCAGTGGTGGGATGGGTGTGGATTATTCCTTTGAGTGCACTGGAGTTGCCCCTTTACTTACTCAGTCTGTGGAAGCCACAAAAGTGGGAACAGGTACAACAATAGCAATTGGCACAGGAACAGAACCTATTATCCCGTTTGGTCTTGCTTCCATTATGTATGGTAGAACTTTGAAAGGTTCTGTTTTTGGGGGGCTCAAAGCCATATCTGACTTGTCCATTGTAGCTAACAAATGCCAAAAAAAGGAATTTCCTATTCAAGAACTATTCACCCATGAGGTTCCATTGACAGATATAAACAAAGCCTTCGAGCTGTTGAAACAGTCCAACTGTGTGAAAGTTGTCATCAAGATGTCACATTGA 1134 0.4233 MPNTSQVITCKAAICWGAGKAVTVEEIQIDPPKATEVRVKMLCASLCHTDISSIQGFPYINYPLALGHEGVGVVESVGDEVSNLKEGDIVIPTYIGECEECENCVSGKTNLCLKYPIRLTGLMPDNTSRLSIRGERLHHVLSCATWSEYMVSDVNYTLKVDPTIDPAHASFISCGFSTGYGAAWKEAKVESGSTVAVFGLGAVGLGAISGAKMLGATKIIGIDKNEMKREKGEAFGMTHFINPDDDSAKSVSELVKELSGGMGVDYSFECTGVAPLLTQSVEATKVGTGTTIAIGTGTEPIIPFGLASIMYGRTLKGSVFGGLKAISDLSIVANKCQKKEFPIQELFTHEVPLTDINKAFELLKQSNCVKVVIKMSH 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0149 377 SMART PKS_ER_names_mod 17 373 IPR020843 GO:0016491
Aed5g0149 377 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Aed5g0149 377 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 335 IPR036291 -
Aed5g0149 377 Pfam Alcohol dehydrogenase GroES-like domain 35 153 IPR013154 -
Aed5g0149 377 SUPERFAMILY GroES-like 327 373 IPR011032 -
Aed5g0149 377 PANTHER ALCOHOL DEHYDROGENASE 5 374 - -
Aed5g0149 377 SUPERFAMILY GroES-like 4 190 IPR011032 -
Aed5g0149 377 Gene3D - 14 370 - -
Aed5g0149 377 Gene3D - 179 318 - -
Aed5g0149 377 Pfam Zinc-binding dehydrogenase 202 322 IPR013149 -
Aed5g0149 377 CDD liver_alcohol_DH_like 8 374 - -
Aed5g0149 377 PANTHER ALCOHOL DEHYDROGENASE-RELATED 5 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0149 Aed-Chr5 1110456 1112544 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0149 35 367 Monolignol Biosynthesis Gene Families AT2G21730 26.409 1.92e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0149 K00121 - gmx:100798341 677.937