Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g0147 ATGCAAAATCCCCAATTGAGTAATCACGATGTTCAAGAGAATATGGTATCACTCGAATCTGGAAAGACATTTGTCAAACATCCTATGATTCAGAACGCTGATATGAGACTCGAATCAGGGACTTGTAATGTGTGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAACCGAGCTCTCATGGGGTCAAAGGCTGAAGAATTCTCTGATGAAAACTGTCGCTTAGGGGAGGCTAATCAGCATTGTGATGAGGGTGATAGATCTTCTCCTGGGAGCAGAGCTTGTGAAAGGTTGGAGCATGCTGTCAGTGAAACCAATCACAAGCCTAGTGTTTCTTCATCTCATGATTCTCTATCCGAAAATGCTGAGAACAGACAAGCCTTATCAGAGAAGTATCAGGATTCCAAGTGTTTAGAAAGTCTTGATGATAACACTTCTTGTATCAGTAGGACCAGTAATGCTAATTTAGCGAGCAGTAGCCATCAAATAAATACAAACAGCATAAATATATCTTGTAGTTCAACTTCAGTTAGTCACTTAGGGGCAGAAAGATCTGGAAATGGGCCATCTATTGACATGTCTGGTTTGTCAGAATGCTGCATGGAAAATGTTGATTCATCATTGACCAGAGAGAAAGTACCTATTATTGTTCTTGGTGAAAAGTCTCTGGCAGATAAGGAAAACCTAAATAATGGTACAGCCAAGGTTTCAATCGAAATATGTCCAAAGTCAGAAGCAGATACTGAAAATAATGTTGATGTTGCTGAAGATGATGATCATAAATATTCAGCCCATGATGGACTGCATGAGAAGGTTGAGGAGCTGGTTAAATCATCTGGCAAGGCCGAACATCAATCAGAAGATGAGAGTGACGAATCAGATGTTGTTGAGCATGATGTAAAAGTATGTGACATCTGTGGAGATGCTGGTCGTGAGGATCTACTTGCCATATGTAGTAGGTGCAGTGATGGTGCAGAGCACACCTACTGCATGCGGGAAATGCTTGAGAAGGTCCCTGAAGGGGACTGGTTATGTGAAGAATGCAAGTGTGCAGAGGAGACTGCAAATCAAAGGCTAGATATAGAAGAAACTTGTTTTCAAAAAGTTAGTTCAACTTTACAAATTTCTGGCAAAAGACCTTCTCAAAGCATGGAAATAGCTACAGCTGCAAAAAGGCAAGCTCTTGAATCGAGCACGGGATCACCAAAGGCATCAAGCCCCAAGAGAATAGTCCCATTGTCACGGGAATCTTCATTCAAGAGCATGGATAAAGGAAAGATGAAATCTGGCCAACAGATCCCCATGCGTAACCACCTCGGTGGCGATGACACAGAACTTGCCCGTTCTCTTTCCACTGGTACTCGGAGTCAAAATACAAGGAGTACATTGTTGAAGTCTAATTCATTCAACAACTTCAATTCCAAGCCAAGAGTCAAACTTGTTGATGAAGTTGTTCCCCAAAAGCAGAAAGGGGGTGTTGAACATATTTCTAAGAATATGGAGACACCTGCTGGGATGATAAGCAAATCAATGTCATTCAAATCCTCGAATTTGGGTCGTACAAATGCTGTTGAATCAAAAGTTAAAATGATTTCTTCTAAGCCTGGAACTGCTCAGGATTTGAAAGCATCAAGACATGCAAAAGAATCTGGTTCGTTTGACAGGAAATTTCTGTCTAAGATTGATCGACCTGTCATTTGTTCAACCATGGTTAGTTCTGTTGTTTCCACATCGAAGGGTGATCAGAAGCCATATGGTGAAACTGCTAAACCTTCTACAGTTAACAACAATCGAGAGGTTAAAAACCAAGATGGAAAATTATATTCATTATCAAAATCTATGAATAATACAAGCAGTAAAAGTCCAGAACCTCAAGTTAGTTCAGATAGAACATCAACAAGTGTTGATGAAACTCAACAGGATAGACTGCCTAGACCACAGGATACAGCTAATCAGGTTGACAAAACCAAAGATAATTCTAATGATCATGTGAGGTCAGGTGTTACTAATGCTTCAAAAAGCTCGCAGGAATTTGGTGCTGATTCATCAGTCATTGCCACAAGTAGTTCAAAAGAGGAGATGAATAAGGGAAATAAATTGAAAGCTGCAATCCAGGCAGCTTTGCTTAGAAGGCCTGAAATACACAAGAGGAAAGAAGCTCCTGATCAAACTAATGAGTTTCCTATGTCAAGCACTGGTTTGAAACGTGAAGTCAGTTCTCAAAACCAAGTGTTGGTTTCCAACACTTTGAAGAATAGTATATCTGCTGAAGAAAGCAATGTGAAGCAGGAAATCATTGAGAATTCAACATTTGAAACCTCCAAATGTCCATCTGCCAATGATCTGAAGCAACTTAAATTTTGTCGAACTGATTTTTGCTCTCAGATGAGAAAGTCAGATTCTGTTGGTCCCACATCTGGAAAGCCTGTGCTGAGAGACTTGCCCATTAATGCCTTGGCAATATCAAGTGTTCTTTCAAAGATGTCAGTCATTCCAGAATATGATTACATCTGGCGGTATGCAACATCTTGTGATGAGCTAGTTTGTCTTTTGTTCAGGATTGCTTTTGTTGTATTACTGTTCATGTTTTGCCATCAAGTGTTTTATGAGTTTTGTTGTTCATGCAGGGGTGTCTTTAAAGTGCATAGAAATGGAAAGTCTCCTGACTTGTATACTGGAATTCAAGCACATTTATCTGCATGTGCTTCCCCTAAGGTTCATGAAGCAGTGAAGAAATTTTTACCTGAAGTCTCTCTAAATGAAGTTTCTCGTTTGAGCACATGGCCTTCACAATTTCATCAAGGTGGTGTTAAGGAAGATAATATTGCTCTTTACTTCTTTGCCAAAGACATTGAAAGGCAAGAATATGAATATCACTCTTTTGTTGACAGTAGCTTTTGA 2898 0.3989 MQNPQLSNHDVQENMVSLESGKTFVKHPMIQNADMRLESGTCNVCSAPCSSCMHLNRALMGSKAEEFSDENCRLGEANQHCDEGDRSSPGSRACERLEHAVSETNHKPSVSSSHDSLSENAENRQALSEKYQDSKCLESLDDNTSCISRTSNANLASSSHQINTNSINISCSSTSVSHLGAERSGNGPSIDMSGLSECCMENVDSSLTREKVPIIVLGEKSLADKENLNNGTAKVSIEICPKSEADTENNVDVAEDDDHKYSAHDGLHEKVEELVKSSGKAEHQSEDESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKCAEETANQRLDIEETCFQKVSSTLQISGKRPSQSMEIATAAKRQALESSTGSPKASSPKRIVPLSRESSFKSMDKGKMKSGQQIPMRNHLGGDDTELARSLSTGTRSQNTRSTLLKSNSFNNFNSKPRVKLVDEVVPQKQKGGVEHISKNMETPAGMISKSMSFKSSNLGRTNAVESKVKMISSKPGTAQDLKASRHAKESGSFDRKFLSKIDRPVICSTMVSSVVSTSKGDQKPYGETAKPSTVNNNREVKNQDGKLYSLSKSMNNTSSKSPEPQVSSDRTSTSVDETQQDRLPRPQDTANQVDKTKDNSNDHVRSGVTNASKSSQEFGADSSVIATSSSKEEMNKGNKLKAAIQAALLRRPEIHKRKEAPDQTNEFPMSSTGLKREVSSQNQVLVSNTLKNSISAEESNVKQEIIENSTFETSKCPSANDLKQLKFCRTDFCSQMRKSDSVGPTSGKPVLRDLPINALAISSVLSKMSVIPEYDYIWRYATSCDELVCLLFRIAFVVLLFMFCHQVFYEFCCSCRGVFKVHRNGKSPDLYTGIQAHLSACASPKVHEAVKKFLPEVSLNEVSRLSTWPSQFHQGGVKEDNIALYFFAKDIERQEYEYHSFVDSSF 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g0147 965 MobiDBLite consensus disorder prediction 274 293 - -
Aed5g0147 965 MobiDBLite consensus disorder prediction 662 692 - -
Aed5g0147 965 MobiDBLite consensus disorder prediction 375 404 - -
Aed5g0147 965 MobiDBLite consensus disorder prediction 572 697 - -
Aed5g0147 965 MobiDBLite consensus disorder prediction 723 739 - -
Aed5g0147 965 MobiDBLite consensus disorder prediction 530 551 - -
Aed5g0147 965 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 867 962 - -
Aed5g0147 965 MobiDBLite consensus disorder prediction 104 125 - -
Aed5g0147 965 SUPERFAMILY FYVE/PHD zinc finger 288 352 IPR011011 -
Aed5g0147 965 MobiDBLite consensus disorder prediction 375 439 - -
Aed5g0147 965 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 35 838 - -
Aed5g0147 965 ProSiteProfiles Zinc finger PHD-type profile. 299 350 IPR019787 -
Aed5g0147 965 MobiDBLite consensus disorder prediction 79 103 - -
Aed5g0147 965 MobiDBLite consensus disorder prediction 572 649 - -
Aed5g0147 965 SMART PHD_3 301 348 IPR001965 -
Aed5g0147 965 MobiDBLite consensus disorder prediction 79 130 - -
Aed5g0147 965 PANTHER - 867 962 - -
Aed5g0147 965 PANTHER - 35 838 - -
Aed5g0147 965 MobiDBLite consensus disorder prediction 715 739 - -
Aed5g0147 965 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 232 361 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g0147 Aed-Chr5 1097921 1104029 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g0147 298 359 C2H2 Transcription Factor Family AT3G01460 35.484 3.57e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g0147 - - gmx:100784908 1508.04